Releases: MicrobialDarkMatter/GraphMB
Releases · MicrobialDarkMatter/GraphMB
v0.2.5
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Update MLflow version
Fix data dir missing from src/graphmb
Add option to write bins to fasta files (--writebins)
v0.2.4
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v0.2.2
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version bump
v0.2.0
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Added
VAE, GCN, SAGE and GAT models based on tensorflow (VAEG code)
SCG-based loss to train VAE and GNNs
Output assembly stats while starting
Eliminate VAMB and DGL dependencies
PyPI installation
Changed
Code structure changed to load data outside of DGL and use DGL only for the GraphSAGE-LSTM model
Log dataloading steps
Write cache to numpy files
Fixed
Feature files are written to specific directies (fixes #17 )
v0.1.5
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v0.1.4
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v0.1.4 Fixes #7
v0.1.3
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delete files
v0.1.2
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Entrypoint setup