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Fix ExpRun's FilePathRoot after a run is moved to another folder. #1007

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Fix ExpRun's FilePathRoot after a run is moved to another folder. #1007

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21 changes: 21 additions & 0 deletions src/org/labkey/targetedms/TargetedMSDataHandler.java
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Original file line number Diff line number Diff line change
Expand Up @@ -32,6 +32,7 @@
import org.labkey.api.pipeline.PipeRoot;
import org.labkey.api.pipeline.PipelineJobException;
import org.labkey.api.pipeline.PipelineService;
import org.labkey.api.query.BatchValidationException;
import org.labkey.api.security.User;
import org.labkey.api.targetedms.RunRepresentativeDataState;
import org.labkey.api.targetedms.TargetedMSService;
Expand Down Expand Up @@ -285,6 +286,26 @@ public void runMoved(ExpData newData, Container container, Container targetConta
newData.save(user);
}

// Fix ExpRun's FilePathRoot if it is still set to the file root of the source folder
ExpRun experimentRun = ExperimentService.get().getExpRun(newRunLSID);
if (experimentRun == null)
{
throw new ExperimentException("Unable to find exprun for lsid " + newRunLSID + ". Cannot set the filePathRoot.");
}
Path newFileRootPath = targetRoot.getRootFileLike().toNioPathForRead();
if (!newFileRootPath.equals(experimentRun.getFilePathRootPath()))
{
experimentRun.setFilePathRootPath(newFileRootPath);
try
{
experimentRun.save(user);
}
catch (BatchValidationException e)
{
throw new ExperimentException(e);
}
}

// Update the run
TargetedMSManager.moveRun(run, targetContainer, newRunLSID, newData.getRowId(), user);

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