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1. Spatial_MCAO Spatial_MCAO Public

   Codebase for the paper Zucha et al. titled "Spatiotemporal transcriptomic map of glial cell response in mouse model of acute brain ischemia"

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2. hiPSC-derived_AxD_models hiPSC-derived_AxD_models Public

   This is the code that was used to analyze two scRNA-seq datasets - co-culture and organoid model of Alexander disease.

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3. hiPSC-derived_early_AxD_organoids hiPSC-derived_early_AxD_organoids Public

   This code was used to analyze bulk RNAseq from early brain organoid data in the scope of the Alexander project.

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