Updated readme

README.md

@@ -1,15 +1,16 @@
 # JRC TEMBA Analysis
 
-To reproduce the results, run `bash run_analysis.sh`
+You can view the source code for this workflow in the [repository](https://github.com/KTH-dESA/jrc_temba)
 
 This repository contains all the scripts and data necessary to reproduce the
 work for JRC TEMBA project.
 
 ## Setup and Installation
 
-To run this analysis you need to install GLPK and one of CBC or CPLEX
+To run this analysis you need to install GLPK and a solver such as CBC, CPLEX or Gurobi
 
-You should also have Python >=3.6 environment setup with the following dependencies:
+You should also have Python >=3.6 environment setup with the following dependencies ideally
+using miniconda so that snakemake can manage custom environments for each of the workflow tasks:
 
 - `pandas`
 - `xlrd`
@@ -25,7 +26,7 @@ number of threads to use e.g. `snakemake -j 8`.
 ## Folder structure
 
 - Input data are stored in `.xlsx` Excel files in the `input_data` folder
-- The OSeMOSYS model file is stored in `model` folder
+- A modified OSeMOSYS model file is stored in `model` folder
 - Temporary output data is stored in the `output_data` folder
 - Final results are stored in `results`
 - All the scripts for intermediate processing are stored in the `scripts` folder