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@JBEI

Joint BioEnergy Institute

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  1. ice ice Public

    Web based Registry platform for managing synthetic biological parts

    Java 42 24

Repositories

Showing 10 of 50 repositories
  • ART Public

    A machine learning tool to improve the effectiveness of strain engineering in synthetic biology

    JBEI/ART’s past year of commit activity
    Jupyter Notebook 59 20 0 0 Updated Nov 20, 2025
  • foldy-internal Public

    Internal foldy

    JBEI/foldy-internal’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Nov 18, 2025
  • foldy Public

    Foldy: a web-based platform for interactive protein structure analysis

    JBEI/foldy’s past year of commit activity
    TypeScript 26 4 4 0 Updated Oct 28, 2025
  • htp_16s Public
    JBEI/htp_16s’s past year of commit activity
    Python 0 0 0 0 Updated Oct 16, 2025
  • Isoprenol_CRISPRi Public

    Using data driving approaches with CRISPRi to improve isoprenol TRY

    JBEI/Isoprenol_CRISPRi’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Sep 22, 2025
  • HamiltonVantage-Yeast_Transformation Public
    JBEI/HamiltonVantage-Yeast_Transformation’s past year of commit activity
    ReScript 0 0 0 0 Updated Sep 9, 2025
  • BioPKS-Pipeline Public
    JBEI/BioPKS-Pipeline’s past year of commit activity
    Jupyter Notebook 2 1 0 0 Updated Aug 10, 2025
  • bayflux Public

    Software tool for Bayesian genome scale 13C Metabolic Flux Analysis

    JBEI/bayflux’s past year of commit activity
    Jupyter Notebook 7 2 0 0 Updated Jun 26, 2025
  • RetroTide Public

    PKS Retrobiosynthesis Tool

    JBEI/RetroTide’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated Mar 31, 2025
  • Flaviolin_media_opt_C3 Public

    Data and notebooks for campaign 2 (C2) of media optimization for maximizing flaviolin yield in P. putida.

    JBEI/Flaviolin_media_opt_C3’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Mar 27, 2025
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