add another example patient

HautaniemiLab · Oct 1, 2024 · fa0893f · fa0893f
1 parent 66a0c4f
commit fa0893f
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Showing 4 changed files with 70 additions and 1 deletion.
diff --git a/data/phylogeny.tsv b/data/phylogeny.tsv
@@ -9,3 +9,11 @@ subclone	parent	color	branchLength	patient
 6	1	#fdbf6f	1651	P2
 7	6	#fb9a99	137	P2
 8	4	#bbbb77	462	P2
+1		#cccccc	4961	P3
+2	1	#a6cee3	239	P3
+4	5	#cab2d6	437	P3
+5	10	#ff99ff	1802	P3
+6	9	#fdbf6f	979	P3
+9	10	#cf8d30	223	P3
+10	1	#41ae76	314	P3
+11	9	#ff7f00	117	P3
diff --git a/data/samples.tsv b/data/samples.tsv
@@ -6,3 +6,7 @@ P1_pPer1_DNA1	pPer1	1		P1
 P2_iOme2_DNA1	iOme2	5	P2_pOme2_DNA1	P2
 P2_iOvaR1_DNA1	iOvaR1	5		P2
 P2_pOme2_DNA1	pOme2	1		P2
+P3_pAsc_DNA1	pAsc	1		P3
+P3_pPer1_DNA	pPer1	1		P3
+P3_r2Asc_DNA	r2Asc	11	P3_rAsc_DNA4	P3
+P3_rAsc_DNA4	rAsc	9	P3_pAsc_DNA1	P3
diff --git a/data/subclones.tsv b/data/subclones.tsv
@@ -17,3 +17,18 @@ P2_pOme2_DNA1	5	0.309	P2
 P2_iOvaR1_DNA1	6	0.3105	P2
 P2_iOvaR1_DNA1	7	0.665	P2
 P2_pOme2_DNA1	8	0.5195	P2
+P3_pPer1_DNA	1	0.1695	P3
+P3_rAsc_DNA4	1	0.054	P3
+P3_pAsc_DNA1	2	0.318	P3
+P3_rAsc_DNA4	2	0.033	P3
+P3_r2Asc_DNA	4	0.95	P3
+P3_r2Asc_DNA	5	0.034	P3
+P3_rAsc_DNA4	5	0.2935	P3
+P3_rAsc_DNA4	6	0.2325	P3
+P3_pAsc_DNA1	9	0.244	P3
+P3_pPer1_DNA	9	0.3165	P3
+P3_rAsc_DNA4	9	0.2945	P3
+P3_rAsc_DNA4	10	0.072	P3
+P3_pAsc_DNA1	11	0.435	P3
+P3_pPer1_DNA	11	0.5145	P3
+P3_rAsc_DNA4	11	0.021	P3