Basic documentation #12
Annotations
10 warnings
../../../.julia/packages/Documenter/C1XEF/src/utilities/utilities.jl#L46
failed to run `@example` block in src/regiongrids/create.md:7-17
```@example regiongrid
using GeoRegions
using DelimitedFiles
using CairoMakie
download("https://raw.githubusercontent.com/natgeo-wong/GeoPlottingData/main/coastline_resl.txt","coast.cst")
coast = readdlm("coast.cst",comments=true)
clon = coast[:,1]
clat = coast[:,2]
nothing
```
exception =
ArgumentError: Package CairoMakie not found in current path.
- Run `import Pkg; Pkg.add("CairoMakie")` to install the CairoMakie package.
Stacktrace:
[1] macro expansion
@ ./loading.jl:1772 [inlined]
[2] macro expansion
@ ./lock.jl:267 [inlined]
[3] __require(into::Module, mod::Symbol)
@ Base ./loading.jl:1753
[4] #invoke_in_world#3
@ ./essentials.jl:926 [inlined]
[5] invoke_in_world
@ ./essentials.jl:923 [inlined]
[6] require(into::Module, mod::Symbol)
@ Base ./loading.jl:1746
[7] eval
@ ./boot.jl:385 [inlined]
[8] #60
@ ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:754 [inlined]
[9] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[10] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:753
[11] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170
[12] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:515
[13] with_logger
@ ./logging.jl:627 [inlined]
[14] capture(f::Documenter.var"#59#61"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any})
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167
[15] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:752
|
../../../.julia/packages/Documenter/C1XEF/src/utilities/utilities.jl#L46
failed to run `@example` block in src/regiongrids/create.md:21-26
```@example regiongrid
geo = GeoRegion("GF_SSA")
lon = -180:5:180
lat = -90:5:90
ggrd = RegionGrid(geo,lon[1:(end-1)],lat)
```
exception =
UndefVarError: `RegionGrid` not defined
Stacktrace:
[1] top-level scope
@ create.md:25
[2] eval
@ ./boot.jl:385 [inlined]
[3] #60
@ ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:754 [inlined]
[4] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[5] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:753
[6] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170
[7] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:515
[8] with_logger
@ ./logging.jl:627 [inlined]
[9] capture(f::Documenter.var"#59#61"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any})
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167
[10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:752
|
../../../.julia/packages/Documenter/C1XEF/src/utilities/utilities.jl#L46
failed to run `@example` block in src/regiongrids/create.md:30-35
```@example regiongrid
geo = GeoRegion("AR6_NWS")
lon = -180:2:180;
lat = -90:2:90;
ggrd = RegionGrid(geo,lon[1:(end-1)],lat)
```
exception =
UndefVarError: `RegionGrid` not defined
Stacktrace:
[1] top-level scope
@ create.md:34
[2] eval
@ ./boot.jl:385 [inlined]
[3] #60
@ ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:754 [inlined]
[4] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[5] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:753
[6] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170
[7] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:515
[8] with_logger
@ ./logging.jl:627 [inlined]
[9] capture(f::Documenter.var"#59#61"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any})
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167
[10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:752
|
../../../.julia/packages/Documenter/C1XEF/src/utilities/utilities.jl#L46
failed to run `@example` block in src/regiongrids/create.md:39-41
```@example regiongrid
ggrd.mask
```
exception =
UndefVarError: `ggrd` not defined
Stacktrace:
[1] top-level scope
@ :0
[2] eval
@ ./boot.jl:385 [inlined]
[3] #60
@ ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:754 [inlined]
[4] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[5] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:753
[6] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170
[7] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:515
[8] with_logger
@ ./logging.jl:627 [inlined]
[9] capture(f::Documenter.var"#59#61"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any})
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167
[10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:752
|
../../../.julia/packages/Documenter/C1XEF/src/utilities/utilities.jl#L46
failed to run `@example` block in src/regiongrids/create.md:47-52
```@example regiongrid
geo = GeoRegion("AR6_SAS")
lon = -180:5:180;
lat = -90:2:90;
ggrd = RegionGrid(geo,lon[1:(end-1)],lat)
```
exception =
UndefVarError: `RegionGrid` not defined
Stacktrace:
[1] top-level scope
@ create.md:51
[2] eval
@ ./boot.jl:385 [inlined]
[3] #60
@ ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:754 [inlined]
[4] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[5] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:753
[6] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170
[7] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:515
[8] with_logger
@ ./logging.jl:627 [inlined]
[9] capture(f::Documenter.var"#59#61"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any})
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167
[10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:752
|
../../../.julia/packages/Documenter/C1XEF/src/utilities/utilities.jl#L46
failed to run `@example` block in src/regiongrids/create.md:56-80
```@example regiongrid
mask = ggrd.mask
grid = ones(size(mask))
inlon = grid .* ggrd.lon; inlon = inlon[.!isnan.(mask)]
inlat = grid .* ggrd.lat'; inlat = inlat[.!isnan.(mask)]
otlon = grid .* ggrd.lon; otlon = otlon[isnan.(mask)]
otlat = grid .* ggrd.lat'; otlat = otlat[isnan.(mask)]
blon,blat,slon,slat = coordGeoRegion(geo)
fig = Figure()
aspect = (maximum(slon)-minimum(slon))/(maximum(slat)-minimum(slat))
ax = Axis(
fig[1,1],width=750,height=750/aspect,
limits=(minimum(slon)-2,maximum(slon)+2,minimum(slat)-2,maximum(slat)+2)
)
lines!(ax,clon,clat,color=:black)
lines!(ax,blon,blat)
lines!(ax,slon,slat)
scatter!(ax,otlon,otlat)
scatter!(ax,inlon,inlat)
resize_to_layout!(fig)
fig
```
exception =
UndefVarError: `ggrd` not defined
Stacktrace:
[1] top-level scope
@ create.md:57
[2] eval
@ ./boot.jl:385 [inlined]
[3] #60
@ ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:754 [inlined]
[4] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[5] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:753
[6] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170
[7] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:515
[8] with_logger
@ ./logging.jl:627 [inlined]
[9] capture(f::Documenter.var"#59#61"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any})
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167
[10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:752
|
../../../.julia/packages/Documenter/C1XEF/src/utilities/utilities.jl#L46
no docs found for 'RegionGrid(::GeoRegion,::Array{<:Real,2},::Array{<:Real,2})' in `@docs` block in src/regiongrids/create.md:84-87
```@docs
RegionGrid(::RectRegion,::Vector{<:Real},::Vector{<:Real})
RegionGrid(::GeoRegion,::Array{<:Real,2},::Array{<:Real,2})
```
|
../../../.julia/packages/Documenter/C1XEF/src/utilities/utilities.jl#L46
failed to run `@example` block in src/using/extract.md:13-23
```@example extract
using GeoRegions
using DelimitedFiles
using CairoMakie
download("https://raw.githubusercontent.com/natgeo-wong/GeoPlottingData/main/coastline_resl.txt","coast.cst")
coast = readdlm("coast.cst",comments=true)
clon = coast[:,1]
clat = coast[:,2]
nothing
```
exception =
ArgumentError: Package CairoMakie not found in current path.
- Run `import Pkg; Pkg.add("CairoMakie")` to install the CairoMakie package.
Stacktrace:
[1] macro expansion
@ ./loading.jl:1772 [inlined]
[2] macro expansion
@ ./lock.jl:267 [inlined]
[3] __require(into::Module, mod::Symbol)
@ Base ./loading.jl:1753
[4] #invoke_in_world#3
@ ./essentials.jl:926 [inlined]
[5] invoke_in_world
@ ./essentials.jl:923 [inlined]
[6] require(into::Module, mod::Symbol)
@ Base ./loading.jl:1746
[7] eval
@ ./boot.jl:385 [inlined]
[8] #60
@ ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:754 [inlined]
[9] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[10] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:753
[11] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170
[12] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:515
[13] with_logger
@ ./logging.jl:627 [inlined]
[14] capture(f::Documenter.var"#59#61"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any})
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167
[15] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:752
|
../../../.julia/packages/Documenter/C1XEF/src/utilities/utilities.jl#L46
failed to run `@example` block in src/using/extract.md:41-43
```@example extract
ggrd = RegionGrid(geo,lon,lat)
```
exception =
UndefVarError: `RegionGrid` not defined
Stacktrace:
[1] top-level scope
@ extract.md:42
[2] eval
@ ./boot.jl:385 [inlined]
[3] #60
@ ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:754 [inlined]
[4] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[5] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:753
[6] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170
[7] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:515
[8] with_logger
@ ./logging.jl:627 [inlined]
[9] capture(f::Documenter.var"#59#61"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any})
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167
[10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:752
|
../../../.julia/packages/Documenter/C1XEF/src/utilities/utilities.jl#L46
failed to run `@example` block in src/using/extract.md:47-49
```@example extract
ndata = extractGrid(odata,ggrd)
```
exception =
UndefVarError: `extractGrid` not defined
Stacktrace:
[1] top-level scope
@ extract.md:48
[2] eval
@ ./boot.jl:385 [inlined]
[3] #60
@ ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:754 [inlined]
[4] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[5] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:753
[6] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170
[7] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:515
[8] with_logger
@ ./logging.jl:627 [inlined]
[9] capture(f::Documenter.var"#59#61"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any})
@ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167
[10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/C1XEF/src/expander_pipeline.jl:752
|
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