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@DigitalSlideArchive

Digital Slide Archive

Tools for the management, visualization, and analysis of digital pathology data.

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  1. digital_slide_archive digital_slide_archive Public

    The official deployment of the Digital Slide Archive and HistomicsTK.

    Python 131 59

  2. HistomicsTK HistomicsTK Public

    A Python toolkit for pathology image analysis algorithms.

    Python 459 127

  3. HistomicsUI HistomicsUI Public

    A Girder plugin for pathology image annotations and analysis.

    JavaScript 77 26

Repositories

Showing 10 of 38 repositories
  • dive-dsa Public

    DIVE for Digital Slide Archive

    DigitalSlideArchive/dive-dsa’s past year of commit activity
    Vue 1 Apache-2.0 0 7 5 Updated Dec 6, 2025
  • girder_volview Public
    DigitalSlideArchive/girder_volview’s past year of commit activity
    Python 3 3 10 1 Updated Dec 5, 2025
  • digital_slide_archive Public

    The official deployment of the Digital Slide Archive and HistomicsTK.

    DigitalSlideArchive/digital_slide_archive’s past year of commit activity
    Python 131 Apache-2.0 59 31 0 Updated Dec 5, 2025
  • HistomicsUI Public

    A Girder plugin for pathology image annotations and analysis.

    DigitalSlideArchive/HistomicsUI’s past year of commit activity
    JavaScript 77 Apache-2.0 26 45 3 Updated Dec 5, 2025
  • DSA-WSI-DeID Public

    A workflow for redacting PHI from whole slide images (WSI) based on the Digital Slide Archive.

    DigitalSlideArchive/DSA-WSI-DeID’s past year of commit activity
    Python 18 Apache-2.0 8 13 0 Updated Dec 1, 2025
  • girder-client-mount Public
    DigitalSlideArchive/girder-client-mount’s past year of commit activity
    Python 1 Apache-2.0 0 0 0 Updated Nov 24, 2025
  • ImageDePHI Public
    DigitalSlideArchive/ImageDePHI’s past year of commit activity
    Python 10 Apache-2.0 2 15 0 Updated Nov 24, 2025
  • HistomicsStream Public

    A whole-slide image reader for TensorFlow

    DigitalSlideArchive/HistomicsStream’s past year of commit activity
    Python 24 Apache-2.0 6 9 0 Updated Nov 24, 2025
  • superpixel-classification Public

    A test cli for classifying superpixels with arbitrary labels

    DigitalSlideArchive/superpixel-classification’s past year of commit activity
    Python 5 4 0 4 Updated Nov 24, 2025
  • HistomicsTK Public

    A Python toolkit for pathology image analysis algorithms.

    DigitalSlideArchive/HistomicsTK’s past year of commit activity
    Python 459 Apache-2.0 127 26 3 Updated Nov 24, 2025
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