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1 change: 1 addition & 0 deletions CHANGELOG.md
Original file line number Diff line number Diff line change
Expand Up @@ -16,6 +16,7 @@ About changelog [here](https://keepachangelog.com/en/1.0.0/)
- Parsing of `REVEL rank score` field for LRS from all transcript of a LRS variant (#5860)
- Tests for cli command to update VCF files not running (#5888)
- Gene in panels search results broken layout - overflow when a panel has many panel versions containing the gene (#5899)
- Include outliers with missing p-value fields in filtering logic ()

## [4.106]
### Added
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2 changes: 1 addition & 1 deletion scout/adapter/mongo/query.py
Original file line number Diff line number Diff line change
Expand Up @@ -867,7 +867,7 @@ def _get_outlier_query(query: dict) -> dict:
}

outlier_padjust_query["$or"].append(pval_struct)

outlier_padjust_query["$or"].append({pval_name: {"$exists": False}})
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Yes, you are on the track. This solves the issue, but breaks the clinical filter.

Image

We will need to test for a condition and/or cross terms as well to make this work with the clinical filter (or in general filtering for both categories, as they will be mutually exclusive.

return outlier_padjust_query


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