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do not use global variables in modules

bugSomething isn't workingSomething isn't working

Status: Open.

#104 In CCBR/LOGAN;

· kelly-sovacool opened on Jun 26, 2025

octopus variant caller does not use available cores & memory

bugSomething isn't workingSomething isn't working

Status: Open.

#103 In CCBR/LOGAN;

· kelly-sovacool opened on Jun 26, 2025

ensure reference genomes match renee

Status: Open.

#94 In CCBR/LOGAN;

· kelly-sovacool opened on May 16, 2025

use nf-schema for parameter validation

Status: Open.

#93 In CCBR/LOGAN;

· kelly-sovacool opened on Apr 16, 2025

Error executing process > 'VC:varscan_tonly (9)'

bugSomething isn't workingSomething isn't working

Status: Open.

#71 In CCBR/LOGAN;

· samarth8392 opened on Jan 29, 2025

Deepsomatic

enhancementNew feature or requestNew feature or request

Status: Open.

#66 In CCBR/LOGAN;

· dnousome opened on Nov 21, 2024

Build DV/Bcftools/GLnexus docker

bugSomething isn't workingSomething isn't working

Status: Open.

#63 In CCBR/LOGAN;

· dnousome opened on Aug 16, 2024

Hg38 Genomes supported

bugSomething isn't workingSomething isn't working

Status: Open.

#59 In CCBR/LOGAN;

· dnousome opened on Jul 22, 2024

Add Flowchart

bugSomething isn't workingSomething isn't working

Status: Open.

#57 In CCBR/LOGAN;

· dnousome opened on Jul 19, 2024

CRAM Compression

enhancementNew feature or requestNew feature or request

Status: Open.

#35 In CCBR/LOGAN;

· dnousome opened on Mar 6, 2024

validate variant calls with seqc2 consortium data

Status: Open.

#33 In CCBR/LOGAN;

· kelly-sovacool opened on Feb 9, 2024

create DAG from nextflow

Status: Open.

#32 In CCBR/LOGAN;

· kelly-sovacool opened on Feb 7, 2024