Skip to content

Rebuild containers for c.utf-8 support - batch 6 #3593

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
wm75 merged 15 commits into from
Jul 14, 2025
Merged

Rebuild containers for c.utf-8 support - batch 6 #3593

Changes from all commits
Commits
Show all changes
15 commits
Select commit Hold shift + click to select a range
c830974
Rebuild batch 6
wm75 Jul 8, 2025
2e3c327
Fix attempt 1
wm75 Jul 8, 2025
9f9d2e6
Fix attempt 2
wm75 Jul 8, 2025
09f37b9
Fix attempt 3
wm75 Jul 8, 2025
5eaad73
Fix attempt 4
wm75 Jul 8, 2025
9433eb5
Fix attempt 5
wm75 Jul 8, 2025
924c3ff
Fix attempt 6
wm75 Jul 8, 2025
51b90b9
Fix attempt 7
wm75 Jul 12, 2025
d44f92a
Merge branch 'master' into batched-container-updates-6
wm75 Jul 12, 2025
29e0212
Fix attempt 8
wm75 Jul 12, 2025
63e7047
Fix attempt 9
wm75 Jul 12, 2025
ffd30da
Fix attempt 10
wm75 Jul 14, 2025
c405dc8
Merge branch 'master' into batched-container-updates-6
wm75 Jul 14, 2025
d9ea768
Fix attempt 11
wm75 Jul 14, 2025
26c43ca
Fix attempt 12
wm75 Jul 14, 2025
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
15 changes: 15 additions & 0 deletions combinations/hash.tsv
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -856,3 +856,18 @@ samtools=1.2,bedtools=2.26.0gx quay.io/bioconda/base-glibc-busybox-bash:latest 1
r-rjson=0.2.20,r-getopt=1.20.3,r-base=3.5.1,bioconductor-diffbind=2.10.0 quay.io/bioconda/base-glibc-busybox-bash:latest 1
ucsc-genepredtobed=357,ucsc-gtftogenepred=357 quay.io/bioconda/base-glibc-busybox-bash:latest 1
kalign3=3.2.2,kcalign=0.5.13 quay.io/bioconda/base-glibc-busybox-bash:latest 1
r-testthat=2.0.1,bioconductor-variantannotation=1.28.3,r-rmysql=0.10.13,r-sqldf=0.4_11,r-plyr=1.8.4,r-devtools=2.0.1,r-getoptlong=0.1.7,bioconductor-rgalaxy=1.26.0,r-data.table=1.12.0 quay.io/bioconda/base-glibc-busybox-bash:latest 1
zip=3.0,searchgui=4.0.12 quay.io/bioconda/base-glibc-busybox-bash:latest 1
scipy=1.4.1,medaka=1.0.3 quay.io/bioconda/base-glibc-busybox-bash:latest 1
r-getopt=1.20.2,bioconductor-dexseq=1.28.1 quay.io/bioconda/base-glibc-busybox-bash:latest 1
star=2.6.0b,samtools=1.8 quay.io/bioconda/base-glibc-busybox-bash:latest 1
unzip,peptide-shaker=2.0.9 quay.io/bioconda/base-glibc-busybox-bash:latest 1
bioconductor-edger=3.20.7,kallisto=0.44.0,trinity=2.8.5 quay.io/bioconda/base-glibc-busybox-bash:latest 1
ucsc-fatotwobit=377,bx-python=0.7.1,six=1.13.0 quay.io/bioconda/base-glibc-busybox-bash:latest 1
samtools=1.11,imagemagick=7.0.10_62,jvarkit-wgscoverageplotter=20201223 quay.io/bioconda/base-glibc-busybox-bash:latest 2
r-argparse=1.0.4,fonts-conda-ecosystem=1,r-base=3.4.1,bioconductor-cummerbund=2.16.0 quay.io/bioconda/base-glibc-busybox-bash:latest 1
samtools=1.9,stringtie=2.1.1 quay.io/bioconda/base-glibc-busybox-bash:latest 1
python=3.6,cufflinks=2.2.1 quay.io/bioconda/base-glibc-busybox-bash:latest 1
searchgui=3.3.10,zip=3.0 quay.io/bioconda/base-glibc-busybox-bash:latest 1
bcbiogff=0.6.4,pybigwig=0.3.13,python=2.7,circos=0.69.8,biopython=1.70,circos-tools=0.23,tar=1.29 quay.io/bioconda/base-glibc-busybox-bash:latest 1
bedtools=2.29.2,samtools=1.9 quay.io/bioconda/base-glibc-busybox-bash:latest 1