-
Notifications
You must be signed in to change notification settings - Fork 226
apt & conda: Update Instructions for Deps
#2629
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Merged
Merged
Changes from all commits
Commits
Show all changes
2 commits
Select commit
Hold shift + click to select a range
File filter
Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
There are no files selected for viewing
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
|
|
@@ -119,16 +119,24 @@ Without MPI: | |
| .. code-block:: bash | ||
|
|
||
| conda create -n warpx-dev -c conda-forge blaspp ccache cmake compilers git lapackpp openpmd-api python numpy scipy yt fftw matplotlib mamba ninja | ||
| conda activate warpx-dev | ||
| source activate warpx-dev | ||
|
|
||
| # compile WarpX with -DWarpX_MPI=OFF | ||
|
|
||
| With MPI (only Linux/macOS): | ||
|
|
||
| .. code-block:: bash | ||
|
|
||
| conda create -n warpx-dev -c conda-forge blaspp ccache cmake compilers git lapackpp openpmd-api=*=mpi_openmpi* python numpy scipy yt fftw=*=mpi_openmpi* matplotlib mamba ninja openmpi | ||
| conda activate warpx-dev | ||
| conda create -n warpx-dev -c conda-forge blaspp ccache cmake compilers git lapackpp "openpmd-api=*=mpi_openmpi*" python numpy scipy yt "fftw=*=mpi_openmpi*" matplotlib mamba ninja openmpi | ||
|
Member
Author
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. Quotes added because |
||
| source activate warpx-dev | ||
|
|
||
| For legacy ``GNUmake`` builds, after each ``source activate warpx-dev``, you also need to set: | ||
|
|
||
| .. code-block:: bash | ||
|
|
||
| export FFTW_HOME=${CONDA_PREFIX} | ||
| export BLASPP_HOME=${CONDA_PREFIX} | ||
| export LAPACKPP_HOME=${CONDA_PREFIX} | ||
|
|
||
|
|
||
| Apt (Debian/Ubuntu) | ||
|
|
@@ -138,3 +146,9 @@ Apt (Debian/Ubuntu) | |
|
|
||
| sudo apt update | ||
| sudo apt install build-essential ccache cmake g++ git libfftw3-mpi-dev libfftw3-dev libhdf5-openmpi-dev libopenmpi-dev pkg-config python3 python3-matplotlib python3-numpy python3-scipy | ||
|
|
||
| # optional: | ||
| # for CUDA, either install | ||
| # https://developer.nvidia.com/cuda-downloads (preferred) | ||
| # or, if your Debian/Ubuntu is new enough, use the packages | ||
| # sudo apt install nvidia-cuda-dev libcub-dev | ||
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
changed because
source activatedoes not pollute.bashrc: https://collegeville.github.io/CW20/WorkshopResources/WhitePapers/huebl-working-with-multiple-pkg-mgrs.pdf