Assistant Professor at the University of Tennessee (@uthsc). Computer engineer working on pangenomics.
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The University of Tennessee Health Science Center (@uthsc)
- https://andreaguarracino.github.io
- https://orcid.org/0000-0001-9744-131X
- @AndresGuarahino
- in/andreaguarracino
- @andreaguarracino.bsky.social
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pangenome/odgi
pangenome/odgi PublicOptimized Dynamic Genome/Graph Implementation: understanding pangenome graphs
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waveygang/wfmash
waveygang/wfmash Publicbase-accurate DNA sequence alignments using WFA and mashmap3
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pangenome/gfalace
pangenome/gfalace Public archivelace up GFA files using panSN path name sub-ranges to coordinate the lacing
1,837 contributions in the last year
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Activity overview
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Contribution activity
August 2025
Created 9 commits in 3 repositories
Opened 2 pull requests in 1 repository
pangenome/pggb
2
merged
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Single run for all-vs-all mapping if num.sequences < 50
This contribution was made on Aug 3
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update PanSN regex to allow optional additional 3 or 4 pieces in naming
This contribution was made on Aug 1
Reviewed 1 pull request in 1 repository
bioconda/bioconda-recipes
1 pull request
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Update impg to 0.3.1
This contribution was made on Aug 1