reconfigure ssl

.github/workflows/uptime.yml

@@ -12,12 +12,16 @@ jobs:
     name: Ping the site
     steps:
     - name: Check the site
-      id: check CeNDR
+      id: check_cendr
       uses: srt32/uptime@master
       with:
         url-to-hit: "https://elegansvariation.org/"
         expected-statuses: "200,301"
 
     - name: ping healthchecks.io
       if: ${{ success() }}
-      run: curl {{ secrets.HEALTHCHECK_URL }}
+      run: curl ${{ secrets.HEALTHCHECK_URL }}
+
+    - name: ping healthchecks.io
+      if: ${{ failure() }}
+      run: curl ${{ secrets.HEALTHCHECK_URL }}/fail

README.md

@@ -15,9 +15,13 @@
 
 # Building the static database
 
-## Building docker container
+
+## Initializing the database
+
+You can create the CeNDR database by running:
 
 ```bash
+flask initdb WS276 # Where WS276 is the version of wormbase
 ```
 
 ## Running the docker container

base/application.py

@@ -62,7 +62,13 @@ def create_app(config=config):
     register_extensions(app)
     register_errorhandlers(app)
     configure_jinja(app)
+    configure_ssl(app)
 
+    return app
+
+
+def configure_ssl(app):
+    """Configure SSL"""
     if os.getenv('HOME') == "/root":
         # Running on server
         app.debug = False
@@ -73,8 +79,6 @@ def create_app(config=config):
         app.config['SECRET_KEY'] = "test"
         debug_toolbar(app)
 
-    return app
-
 
 def register_commands(app):
     """Register custom commands for the Flask CLI."""