Supporting repository for "Three Metaheuristic Approaches for Tumor Phylogeny Inference"

Reproduce Experiments 1-6

Run all the tools

bash runall.sh # for alpha=0.15
bash runall.fn20.sh # for alpha=0.20

Compute the distances

bash csv.sh # for alpha=0.15
bash csv.fn20.sh # for alpha=0.20

Reproduce Experiment 7

This requires more time and runs only SASC and PSO

bash runall.large.sh
bash csv.large.sh

Plotting Experiments 1-7

Make the plots using results.ipynb