PyPI + Conda builds #2
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| strategy: | ||
| fail-fast: false | ||
| matrix: | ||
| config_file: | ||
| [ | ||
| "conda_package/variants/win_64_cuda_compilercuda-nvcccuda_compiler_version12.0numpy1.22python3.10.____cpython.yaml", | ||
| "conda_package/variants/win_64_cuda_compilercuda-nvcccuda_compiler_version12.0numpy1.22python3.9.____cpython.yaml", | ||
| "conda_package/variants/win_64_cuda_compilercuda-nvcccuda_compiler_version12.0numpy1.23python3.11.____cpython.yaml", | ||
| "conda_package/variants/win_64_cuda_compilercuda-nvcccuda_compiler_version12.0numpy1.26python3.12.____cpython.yaml", | ||
| ] | ||
| runs-on: windows-2022 | ||
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| steps: | ||
| - uses: actions/checkout@v4 | ||
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| - uses: conda-incubator/setup-miniconda@v3 | ||
| with: | ||
| miniconda-version: "latest" | ||
| activate-environment: ../deploy-env | ||
| python-version: "3.10" | ||
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| - name: Add msbuild to PATH | ||
| uses: microsoft/setup-msbuild@v2 | ||
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| - name: Setup CUDA Toolkit | ||
| id: cuda-toolkit | ||
| shell: pwsh | ||
| run: conda_package/scripts/setup_cuda.ps1 | ||
| env: | ||
| INPUT_CUDA_VERSION: 12.0.0 | ||
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| - name: Build openmm package | ||
| shell: bash -l {0} | ||
| run: | | ||
| git config --global --add safe.directory '*' | ||
| conda install anaconda-client conda-build | ||
| conda clean --all -y | ||
| conda build conda_package/recipe/ --variant-config-files ${{ matrix.config_file }} --output-folder ./pkg/ --no-include-recipe --no-anaconda-upload -c conda-forge | ||
| env: | ||
| OPENMM_VERSION: ${{ github.ref_name }} | ||
| OPENMM_COMMIT: ${{ github.sha }} | ||
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| - name: Upload to conda | ||
| shell: bash -l {0} | ||
| run: | | ||
| anaconda -t ${{ secrets.ANACONDA_TOKEN_BASIC }} upload -u acellera pkg/*/openmm-*.conda --skip-existing |
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Workflow does not contain permissions Medium
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Copilot Autofix
AI 5 months ago
To fix the issue, we will add a permissions block at the workflow level to define the minimal permissions required for the workflow. Based on the operations in the workflow, the following permissions are necessary:
contents: readfor accessing repository contents.packages: writefor uploading packages to the repository.
This change will ensure that the workflow has only the permissions it needs, reducing the risk of unintended access.
Suggested changeset
1
.github/workflows/conda_publish.yml
| @@ -2,2 +2,6 @@ | ||
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| permissions: | ||
| contents: read | ||
| packages: write | ||
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| on: |
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