Merge branch 'master' of https://github.com/waqasuddinkhan/MACARON-GenMed-LabEx

Author: waqasuddinkhan

MACARON

@@ -234,6 +234,8 @@ Field Number | Field Name | Description
 
 # Validating SNVs Existed on the Same Reads
 
+**NB: You do not need to run this step if you already used phased VCF file to run MACARON**
+
 To confirm the existence of multi-SNVs within the same genetic codon, an accessory BASH-shell script [MACARON_validate.sh](MACARON_validate.sh) calculates the read count information of affected bases. This script requires as an input subset of BAM files (should be the same that used to generate the input VCF file) covering 50 bps over each SnpCluster.
 
 Subset of any BAM file can be generated by using the following command: