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python/CHANGELOG.rst

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--------------------
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[0.5.7] - 2023-XX-XX
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[0.5.8] - 2024-XX-XX
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--------------------
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**Breaking Changes**
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- The VCF writing methods (`ts.write_vcf`, `ts.as_vcf`) now error if a site with
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position zero is encountered. The VCF spec does not allow zero position sites.
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Suppress this error with the `allow_position_zero` argument.
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(:user:`benjeffery`, :pr:`2901`, :issue:`2838`)
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**Features**
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- Add ``TreeSequence.extend_edges`` method that extends ancestral haplotypes
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- Add ``Table.drop_metadata`` to make clearing metadata from tables easy.
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(:user:`jeromekelleher`, :pr:`2944`)
2013

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--------------------
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[0.5.7] - 2024-06-17
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--------------------
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**Breaking Changes**
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- The VCF writing methods (`ts.write_vcf`, `ts.as_vcf`) now error if a site with
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position zero is encountered. The VCF spec does not allow zero position sites.
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Suppress this error with the `allow_position_zero` argument.
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(:user:`benjeffery`, :pr:`2901`, :issue:`2838`)
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**Bugfixes**
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- Fix to the folded, expected allele frequency spectrum (i.e.,

python/tskit/_version.py

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# Definitive location for the version number.
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# During development, should be x.y.z.devN
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# For beta should be x.y.zbN
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tskit_version = "0.5.7.dev0"
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tskit_version = "0.5.8.dev0"

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