No module named 'pyhealth.datasets.tuab'

[LspongebobJH]

Bug:

---------------------------------------------------------------------------
ModuleNotFoundError                       Traceback (most recent call last)
Cell In[3], line 1
----> 1 from pyhealth.datasets import MIMIC3Dataset

File [.../pyhealth/datasets/__init__.py:12](...)
     10 from .isruc import ISRUCDataset
     11 from .shhs import SHHSDataset
---> 12 from .tuab import TUABDataset
     13 from .tuev import TUEVDataset
     14 from .sample_dataset import SampleBaseDataset, SampleSignalDataset, SampleEHRDataset

ModuleNotFoundError: No module named 'pyhealth.datasets.tuab'

PyHealth version: v1.1.6

I quickly check your source codes and found that:

1. In source codes tagged v1.1.6, there is a tuab.py in datasets/
2. In pyhealth v1.1.6 release in Releases, tuab.py is missed from datasets/, but is still invoked in datasets/__init__.py.

I suppose there are some bugs in v1.1.6 release.

[jhnwu3]

Hey, sorry for the late response, we've been undergoing a lot of changes recently. It should exist as far as I see in my current copy of PyHealth and the latest master branch. Can you share some more details? Or re-install? You can also clone the repo and install, and that might resolve some weird issues going on.

[nkapila6]

I face the same error too @jhnwu3.

Have to revert to 1.1.4 to fix it.

[jhnwu3]

We'll be releasing a new version of PyHealth soon (i.e PyHealth 2.0) after the webinar today, so maybe we can force update it through the latest version. I'll send an update soon on how that works. In the meanwhile, if you have discord, we'd love to get more feedback here: https://discord.gg/mpb835EHaX