fast k-fold cross-validation

Author: stephaneguindon

config.h

@@ -8,7 +8,7 @@
 #define DEBUG 1
 
 /* EVOLVE tag on */
-#define EVOLVE 1
+/* #undef EVOLVE */
 
 /* Define to 1 if you don't have `vprintf' but do have `_doprnt.' */
 /* #undef HAVE_DOPRNT */
@@ -92,7 +92,7 @@
 #define PACKAGE_VERSION "3.3.20250429"
 
 /* PHYML tag on */
-/* #undef PHYML */
+#define PHYML 1
 
 /* PHYREX tag on */
 /* #undef PHYREX */

config.log

@@ -4,7 +4,7 @@ running configure, to aid debugging if configure makes a mistake.
 It was created by PhyML configure 3.3.20250429, which was
 generated by GNU Autoconf 2.71.  Invocation command line was
 
-  $ ./configure --enable-evolve
+  $ ./configure
 
 ## --------- ##
 ## Platform. ##
@@ -30,8 +30,8 @@ Kernel configured for up to 8 processors.
 Processor type: arm64e (ARM64E)
 Processors active: 0 1 2 3 4 5 6 7
 Primary memory available: 8.00 gigabytes
-Default processor set: 499 tasks, 2459 threads, 8 processors
-Load average: 2.62, Mach factor: 5.37
+Default processor set: 450 tasks, 2297 threads, 8 processors
+Load average: 1.78, Mach factor: 6.21
 /bin/machine           = unknown
 /usr/bin/oslevel       = unknown
 /bin/universe          = unknown
@@ -533,8 +533,8 @@ STRIP=''
 VERSION='3.3.20250429'
 WANT_DATE_FALSE=''
 WANT_DATE_TRUE='#'
-WANT_EVOLVE_FALSE='#'
-WANT_EVOLVE_TRUE=''
+WANT_EVOLVE_FALSE=''
+WANT_EVOLVE_TRUE='#'
 WANT_MPI_FALSE=''
 WANT_MPI_TRUE='#'
 WANT_PHYML_FALSE=''
@@ -639,6 +639,6 @@ target_alias=''
 #define HAVE_SQRT 1
 #define HAVE_STRCHR 1
 #define HAVE_STRSTR 1
-#define EVOLVE 1
+#define PHYML 1
 
 configure: exit 0

config.status

@@ -420,7 +420,7 @@ $config_commands
 
 Report bugs to <stephane.guindon@lirmm.fr>."
 
-ac_cs_config='--enable-evolve'
+ac_cs_config=''
 ac_cs_version="\
 PhyML config.status 3.3.20250429
 configured by ./configure, generated by GNU Autoconf 2.71,
@@ -512,7 +512,7 @@ if $ac_cs_silent; then
 fi
 
 if $ac_cs_recheck; then
-  set X /bin/sh './configure'  '--enable-evolve' $ac_configure_extra_args --no-create --no-recursion
+  set X /bin/sh './configure'  $ac_configure_extra_args --no-create --no-recursion
   shift
   \printf "%s\n" "running CONFIG_SHELL=/bin/sh $*" >&6
   CONFIG_SHELL='/bin/sh'
@@ -619,8 +619,8 @@ S["WANT_PHYREXSIM_FALSE"]=""
 S["WANT_PHYREXSIM_TRUE"]="#"
 S["WANT_PHYREX_FALSE"]=""
 S["WANT_PHYREX_TRUE"]="#"
-S["WANT_EVOLVE_FALSE"]="#"
-S["WANT_EVOLVE_TRUE"]=""
+S["WANT_EVOLVE_FALSE"]=""
+S["WANT_EVOLVE_TRUE"]="#"
 S["WANT_TEST_FALSE"]=""
 S["WANT_TEST_TRUE"]="#"
 S["WANT_RF_FALSE"]=""
@@ -808,7 +808,7 @@ D["HAVE_RINT"]=" 1"
 D["HAVE_SQRT"]=" 1"
 D["HAVE_STRCHR"]=" 1"
 D["HAVE_STRSTR"]=" 1"
-D["EVOLVE"]=" 1"
+D["PHYML"]=" 1"
   for (key in D) D_is_set[key] = 1
   FS = ""
 }