_pkgdown.yml

template:
  params:
    bootswatch: simplex

authors:
  Stevie Pederson:
    href: https://github.com/smped

reference:

- title: Overview
  contents:
    - starts_with("extraChIPs")

- title: Range-Based Operations
  contents:
    - makeConsensus
    - mapGrlCols
    - ends_with("MC")
    - ends_with("Overlap")
    - colToRanges
    - defineRegions
    - partitionRanges
    - stitchRanges

- title: Functions For Differential Signal Analysis
  contents:
    - dualFilter
    - ends_with("Peaks")
    - fitAssayDiff
    - getProfileData
    - grlToSE
    - mapByFeature
    - starts_with("mergeBy")
    - voomWeightsFromCPM

- title: Visualisation
  contents:
    - starts_with("plot")

- title: Coercion & Convenience Functions
  contents:
    - starts_with("addDiff")
    - contains("as_tibble")
    - collapseGenes
    - defineSeqinfo

- title: Data Objects
  contents:
    - contains("cytobands")
    - starts_with("ex_")
    - fixed_width_datasets

navbar:
  type: default
  left:
  - text: Reference
    href: reference/index.html
  - text: Vignettes
    menu:
    - text: Range-based Operations
      href: articles/range_based_functions.html
    - text: Differential Signal Using Sliding Windows
      href: articles/differential_signal_sliding.html
    - text: Differential Signal Using Fixed-Width Windows
      href: articles/differential_signal_fixed.html
  - text: News
    href: news/index.html
  right:
  - icon: fa-github fa-lg
    href: https://github.com/smped/extraChIPs