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Enhance Clustering Resolution Selection with Hierarchical Tree Visualization #3533

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joe-jhou2 opened this issue Mar 28, 2025 · 2 comments · May be fixed by #3532
Open

Enhance Clustering Resolution Selection with Hierarchical Tree Visualization #3533

joe-jhou2 opened this issue Mar 28, 2025 · 2 comments · May be fixed by #3532

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@joe-jhou2
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What kind of feature would you like to request?

Additional function parameters / changed functionality / changed defaults?

Please describe your wishes

To assist users in selecting the appropriate clustering resolution and understanding the key genes driving cluster splits, implement a hierarchical tree visualization. This tree should illustrate how clusters evolve as the resolution increases, with each child node representing a finer cluster derived from its parent. Additionally, label each child node with the main driving genes that differentiate it from its parent cluster.
The result shown as

Image

@joe-jhou2 joe-jhou2 added the Triage 🩺 This issue needs to be triaged by a maintainer label Mar 28, 2025
@joe-jhou2
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#3532

@flying-sheep flying-sheep added Area - Plotting 🌺 and removed Triage 🩺 This issue needs to be triaged by a maintainer labels Mar 28, 2025
@joe-jhou2
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@flying-sheep Could you add this PR to the current milestone? Or it should pass all tests first? Thanks.

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