From 84a94c51e1ae6f5a4957db4b06f619156e5309eb Mon Sep 17 00:00:00 2001
From: frcroth <frcroth@gmail.com>
Date: Wed, 28 Feb 2024 14:04:35 +0100
Subject: [PATCH 01/14] Update config.yml

---
 .circleci/config.yml | 4 ++++
 1 file changed, 4 insertions(+)

diff --git a/.circleci/config.yml b/.circleci/config.yml
index 749f2360c6b..eab6de8eb56 100644
--- a/.circleci/config.yml
+++ b/.circleci/config.yml
@@ -240,6 +240,10 @@ jobs:
       - run:
           name: Report coverage
           command: .circleci/not-on-master.sh docker-compose run base yarn coverage || true
+      - run:
+          name: Install dev deployment
+          command: |
+            .circleci/not-on-master.sh curl -X POST -H "X-Auth-Token: $RELEASE_API_TOKEN" "https://kubernetix.scm.io/hooks/install/webknossos/dev/${CIRCLE_BRANCH}?user=CI+%28nightly%29"
       - run:
           name: Send Slack notification (master only)
           command: .circleci/slack-notification.sh

From 0a07c7c26aabacfd2dfc2d5e9d9b13c4199b323a Mon Sep 17 00:00:00 2001
From: frcroth <frcroth@gmail.com>
Date: Wed, 28 Feb 2024 14:24:58 +0100
Subject: [PATCH 02/14] Another commit


From ca0e2172c06c72519d56291f914b7da61787541c Mon Sep 17 00:00:00 2001
From: frcroth <frcroth@gmail.com>
Date: Wed, 28 Feb 2024 15:26:05 +0100
Subject: [PATCH 03/14] Check draft status

---
 .circleci/config.yml | 178 +++----------------------------------------
 1 file changed, 11 insertions(+), 167 deletions(-)

diff --git a/.circleci/config.yml b/.circleci/config.yml
index eab6de8eb56..b6b0a3b0c90 100644
--- a/.circleci/config.yml
+++ b/.circleci/config.yml
@@ -29,89 +29,6 @@ jobs:
           command: |
             docker pull scalableminds/webknossos-dev:$NORMALIZED_BRANCH || true
             DEV_CACHE=$NORMALIZED_BRANCH docker-compose build base
-      - run:
-          name: Prepare dependency folders
-          command: mkdir -p project/target target ~/.ivy2 ~/.cache/coursier ~/.cache/yarn
-      - restore_cache:
-          name: Restore target cache
-          keys:
-            - target-cache-{{ checksum ".circleci/cache_version" }}-{{ .Branch }}
-            - target-cache-{{ checksum ".circleci/cache_version" }}-master
-      - restore_cache:
-          name: Restore sbt cache
-          keys:
-            - sbt-cache-{{ checksum ".circleci/cache_version" }}-{{ checksum "project/Dependencies.scala" }}
-            - sbt-cache-{{ checksum ".circleci/cache_version" }}-
-      - restore_cache:
-          name: Restore yarn cache
-          keys:
-            - yarn-cache-{{ checksum ".circleci/cache_version" }}-{{ checksum "yarn.lock" }}
-            - yarn-cache-{{ checksum ".circleci/cache_version" }}-
-      - run:
-          name: Install frontend dependencies
-          command: docker-compose run -e PUPPETEER_SKIP_CHROMIUM_DOWNLOAD=true base yarn install --frozen-lockfile
-      - run:
-          name: Assert unique evolution numbers
-          command: docker-compose run base tools/postgres/dbtool.js assert-unique-evolution-numbers
-      - restore_cache:
-          name: Restore webpack cache
-          keys:
-            - webpack-cache-{{ checksum ".circleci/cache_version" }}-{{ .Branch }}
-            - webpack-cache-{{ checksum ".circleci/cache_version" }}-master
-      - run:
-          name: Assert schema.sql and evolutions are equal
-          command: |
-            docker-compose up -d postgres
-            sleep 3
-            docker-compose run compile tools/postgres/dbtool.js check-evolutions-schema
-      - run:
-          name: Build frontend documentation
-          command: docker-compose run base yarn run docs
-      - run:
-          name: Build webknossos (webpack)
-          command: |
-            docker-compose run base yarn build
-      - run:
-          name: Build webknossos (sbt)
-          command: |
-            if [ "${CIRCLE_BRANCH}" == "master" ]; then
-              docker-compose run compile sbt -no-colors clean compile stage
-            else
-              docker-compose run compile sbt -no-colors -DfailOnWarning compile stage
-            fi
-      - run:
-          name: Build webknossos-datastore (sbt)
-          command: docker-compose run base sbt -no-colors -DfailOnWarning "project webknossosDatastore" copyMessages compile stage
-
-      - run:
-          name: Build webknossos-tracingstore (sbt)
-          command: docker-compose run base sbt -no-colors -DfailOnWarning "project webknossosTracingstore" copyMessages compile stage
-
-      - save_cache:
-          name: Save target cache
-          key: target-cache-{{ checksum ".circleci/cache_version" }}-{{ .Branch }}-{{ .Revision }}
-          paths:
-            - "project/target"
-            - "target"
-
-      - save_cache:
-          name: Save sbt cache
-          key: sbt-cache-{{ checksum ".circleci/cache_version" }}-{{ checksum "project/Dependencies.scala" }}
-          paths:
-            - "~/.ivy2"
-            - "~/.cache/coursier"
-
-      - save_cache:
-          name: Save yarn cache
-          key: yarn-cache-{{ checksum ".circleci/cache_version" }}-{{ checksum "yarn.lock" }}
-          paths:
-            - "~/.cache/yarn"
-
-      - save_cache:
-          name: Save webpack cache
-          key: webpack-cache-{{ checksum ".circleci/cache_version" }}-{{ .Branch }}-{{ .Revision }}
-          paths:
-            - "node_modules/.cache/webpack"
 
       - run:
           name: Build webknossos docker image
@@ -124,86 +41,6 @@ jobs:
       - run:
           name: Build webknossos-tracingstore docker image
           command: docker-compose build --pull webknossos-tracingstore
-
-      - run:
-          name: Lint frontend code (rome and eslint) and check formatting
-          command: |
-            .circleci/not-on-master.sh docker-compose run base bash -c "yarn run lint && yarn run am-i-pretty"
-      - run:
-          name: Check for cyclic dependencies in front-end
-          command: |
-            .circleci/not-on-master.sh docker-compose run base yarn check-cyclic-dependencies
-      - run:
-          name: Run frontend tests
-          command: |
-            .circleci/not-on-master.sh docker-compose run base yarn test-verbose
-      - run:
-          name: Lint backend code and check formatting
-          command: |
-            .circleci/not-on-master.sh docker-compose run backend-lint-format
-      - run:
-          name: Run backend tests
-          command: |
-            .circleci/not-on-master.sh docker-compose run backend-tests
-      - run:
-          name: Run end-to-end tests
-          command: |
-            for i in {1..3}; do # retry
-              .circleci/not-on-master.sh docker-compose run e2e-tests && s=0 && break || s=$?
-            done
-            (exit $s)
-      - run:
-          name: Validate frontend types
-          command: |
-            .circleci/not-on-master.sh docker-compose run base yarn typecheck
-      - run:
-          name: Start webknossos
-          background: true
-          command: docker-compose up webknossos
-      - run:
-          name: Run webknossos smoke test
-          command: |
-            for i in {1..10}; do # retry
-              sleep 10
-              curl --fail -v http://localhost:9000/api/health && s=0 && break || s=$?
-            done
-            (exit $s)
-      - run:
-          name: Stop webknossos
-          command: docker-compose down --volumes --remove-orphans
-
-      - run:
-          name: Start webknossos-datastore
-          background: true
-          command: docker-compose up webknossos-datastore
-      - run:
-          name: Run webknossos-datastore smoke test
-          command: |
-            for i in {1..10}; do # retry
-              sleep 10
-              curl --fail -v http://localhost:9090/data/health && s=0 && break || s=$?
-            done
-            (exit $s)
-      - run:
-          name: Stop webknossos-datastore
-          command: docker-compose down --volumes --remove-orphans
-
-      - run:
-          name: Start webknossos-tracingstore
-          background: true
-          command: docker-compose up webknossos-tracingstore
-      - run:
-          name: Run webknossos-tracingstore smoke test
-          command: |
-            for i in {1..10}; do # retry
-              sleep 10
-              curl --fail -v http://localhost:9050/tracings/health && s=0 && break || s=$?
-            done
-            (exit $s)
-      - run:
-          name: Stop webknossos-tracingstore
-          command: docker-compose down --volumes --remove-orphans
-
       - run:
           name: Push docker images
           command: |
@@ -237,13 +74,20 @@ jobs:
               retry docker push scalableminds/webknossos-dev:${NORMALIZED_BRANCH}
             fi
             docker logout
-      - run:
-          name: Report coverage
-          command: .circleci/not-on-master.sh docker-compose run base yarn coverage || true
       - run:
           name: Install dev deployment
           command: |
-            .circleci/not-on-master.sh curl -X POST -H "X-Auth-Token: $RELEASE_API_TOKEN" "https://kubernetix.scm.io/hooks/install/webknossos/dev/${CIRCLE_BRANCH}?user=CI+%28nightly%29"
+            if [ "${CIRCLE_BRANCH}" == "master" ]; then
+              PR_URL="$CIRCLE_PULL_REQUEST"
+              PR_NUMBER=$(echo $PR_URL | awk -F'/' '{print $NF}')
+              IS_DRAFT=curl "https://api.github.com/repos/scalableminds/webknossos/pulls/$PR_NUMBER" | jq '.draft'
+                if [ "$IS_DRAFT" == "true" ]; then
+                    echo "PR is a draft, not installing dev deployment"
+                else
+                    curl -X POST -H "X-Auth-Token: $RELEASE_API_TOKEN" "https://kubernetix.scm.io/hooks/install/webknossos/dev/${CIRCLE_BRANCH}?user=CI+%28nightly%29"
+                    echo "Installed to $NORMALIZED:BRANCH.webknossos.xyz"
+                fi
+            fi
       - run:
           name: Send Slack notification (master only)
           command: .circleci/slack-notification.sh

From d9d31791140742ad568bbcf3f0d7192c8b97362a Mon Sep 17 00:00:00 2001
From: frcroth <frcroth@gmail.com>
Date: Wed, 28 Feb 2024 15:34:28 +0100
Subject: [PATCH 04/14] Restore some building

---
 .circleci/config.yml | 82 ++++++++++++++++++++++++++++++++++++++++++++
 1 file changed, 82 insertions(+)

diff --git a/.circleci/config.yml b/.circleci/config.yml
index b6b0a3b0c90..9577ad1a975 100644
--- a/.circleci/config.yml
+++ b/.circleci/config.yml
@@ -29,7 +29,89 @@ jobs:
           command: |
             docker pull scalableminds/webknossos-dev:$NORMALIZED_BRANCH || true
             DEV_CACHE=$NORMALIZED_BRANCH docker-compose build base
+      - run:
+          name: Prepare dependency folders
+          command: mkdir -p project/target target ~/.ivy2 ~/.cache/coursier ~/.cache/yarn
+      - restore_cache:
+          name: Restore target cache
+          keys:
+            - target-cache-{{ checksum ".circleci/cache_version" }}-{{ .Branch }}
+            - target-cache-{{ checksum ".circleci/cache_version" }}-master
+      - restore_cache:
+          name: Restore sbt cache
+          keys:
+            - sbt-cache-{{ checksum ".circleci/cache_version" }}-{{ checksum "project/Dependencies.scala" }}
+            - sbt-cache-{{ checksum ".circleci/cache_version" }}-
+      - restore_cache:
+          name: Restore yarn cache
+          keys:
+            - yarn-cache-{{ checksum ".circleci/cache_version" }}-{{ checksum "yarn.lock" }}
+            - yarn-cache-{{ checksum ".circleci/cache_version" }}-
+      - run:
+          name: Install frontend dependencies
+          command: docker-compose run -e PUPPETEER_SKIP_CHROMIUM_DOWNLOAD=true base yarn install --frozen-lockfile
+      - run:
+          name: Assert unique evolution numbers
+          command: docker-compose run base tools/postgres/dbtool.js assert-unique-evolution-numbers
+      - restore_cache:
+          name: Restore webpack cache
+          keys:
+            - webpack-cache-{{ checksum ".circleci/cache_version" }}-{{ .Branch }}
+            - webpack-cache-{{ checksum ".circleci/cache_version" }}-master
+      - run:
+          name: Assert schema.sql and evolutions are equal
+          command: |
+            docker-compose up -d postgres
+            sleep 3
+            docker-compose run compile tools/postgres/dbtool.js check-evolutions-schema
+      - run:
+          name: Build frontend documentation
+          command: docker-compose run base yarn run docs
+      - run:
+          name: Build webknossos (webpack)
+          command: |
+            docker-compose run base yarn build
+      - run:
+          name: Build webknossos (sbt)
+          command: |
+            if [ "${CIRCLE_BRANCH}" == "master" ]; then
+              docker-compose run compile sbt -no-colors clean compile stage
+            else
+              docker-compose run compile sbt -no-colors -DfailOnWarning compile stage
+            fi
+      - run:
+          name: Build webknossos-datastore (sbt)
+          command: docker-compose run base sbt -no-colors -DfailOnWarning "project webknossosDatastore" copyMessages compile stage
+
+      - run:
+          name: Build webknossos-tracingstore (sbt)
+          command: docker-compose run base sbt -no-colors -DfailOnWarning "project webknossosTracingstore" copyMessages compile stage
+
+      - save_cache:
+          name: Save target cache
+          key: target-cache-{{ checksum ".circleci/cache_version" }}-{{ .Branch }}-{{ .Revision }}
+          paths:
+            - "project/target"
+            - "target"
+
+      - save_cache:
+          name: Save sbt cache
+          key: sbt-cache-{{ checksum ".circleci/cache_version" }}-{{ checksum "project/Dependencies.scala" }}
+          paths:
+            - "~/.ivy2"
+            - "~/.cache/coursier"
+
+      - save_cache:
+          name: Save yarn cache
+          key: yarn-cache-{{ checksum ".circleci/cache_version" }}-{{ checksum "yarn.lock" }}
+          paths:
+            - "~/.cache/yarn"
 
+      - save_cache:
+          name: Save webpack cache
+          key: webpack-cache-{{ checksum ".circleci/cache_version" }}-{{ .Branch }}-{{ .Revision }}
+          paths:
+            - "node_modules/.cache/webpack"
       - run:
           name: Build webknossos docker image
           command: docker-compose build --pull webknossos

From d26aa146a5b63a45f7349f45aeeee63e6faf1579 Mon Sep 17 00:00:00 2001
From: frcroth <frcroth@gmail.com>
Date: Wed, 28 Feb 2024 15:45:24 +0100
Subject: [PATCH 05/14] Fix master check

---
 .circleci/config.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.circleci/config.yml b/.circleci/config.yml
index 9577ad1a975..6b5f15e2669 100644
--- a/.circleci/config.yml
+++ b/.circleci/config.yml
@@ -159,7 +159,7 @@ jobs:
       - run:
           name: Install dev deployment
           command: |
-            if [ "${CIRCLE_BRANCH}" == "master" ]; then
+            if [ "${CIRCLE_BRANCH}" != "master" ]; then
               PR_URL="$CIRCLE_PULL_REQUEST"
               PR_NUMBER=$(echo $PR_URL | awk -F'/' '{print $NF}')
               IS_DRAFT=curl "https://api.github.com/repos/scalableminds/webknossos/pulls/$PR_NUMBER" | jq '.draft'

From d0db00c194fb45473618bcc5b5aa50bacee96a8c Mon Sep 17 00:00:00 2001
From: frcroth <frcroth@gmail.com>
Date: Wed, 28 Feb 2024 16:03:49 +0100
Subject: [PATCH 06/14] Fix is draft check

---
 .circleci/config.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.circleci/config.yml b/.circleci/config.yml
index 6b5f15e2669..842f74278f8 100644
--- a/.circleci/config.yml
+++ b/.circleci/config.yml
@@ -162,7 +162,7 @@ jobs:
             if [ "${CIRCLE_BRANCH}" != "master" ]; then
               PR_URL="$CIRCLE_PULL_REQUEST"
               PR_NUMBER=$(echo $PR_URL | awk -F'/' '{print $NF}')
-              IS_DRAFT=curl "https://api.github.com/repos/scalableminds/webknossos/pulls/$PR_NUMBER" | jq '.draft'
+              IS_DRAFT=$(curl "https://api.github.com/repos/scalableminds/webknossos/pulls/${PR_NUMBER}" | jq '.draft')
                 if [ "$IS_DRAFT" == "true" ]; then
                     echo "PR is a draft, not installing dev deployment"
                 else

From 3ef88ac717e29df764eb9b5bb7b720e52f6fe740 Mon Sep 17 00:00:00 2001
From: frcroth <frcroth@gmail.com>
Date: Wed, 28 Feb 2024 17:15:14 +0100
Subject: [PATCH 07/14] Fix typo

---
 .circleci/config.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.circleci/config.yml b/.circleci/config.yml
index 842f74278f8..dac0be7ab22 100644
--- a/.circleci/config.yml
+++ b/.circleci/config.yml
@@ -167,7 +167,7 @@ jobs:
                     echo "PR is a draft, not installing dev deployment"
                 else
                     curl -X POST -H "X-Auth-Token: $RELEASE_API_TOKEN" "https://kubernetix.scm.io/hooks/install/webknossos/dev/${CIRCLE_BRANCH}?user=CI+%28nightly%29"
-                    echo "Installed to $NORMALIZED:BRANCH.webknossos.xyz"
+                    echo "\nInstalled to $NORMALIZED_BRANCH.webknossos.xyz"
                 fi
             fi
       - run:

From 04f5600555aa611db8eae54c6ecb0284aab1f2a6 Mon Sep 17 00:00:00 2001
From: frcroth <frcroth@gmail.com>
Date: Mon, 18 Mar 2024 10:21:18 +0100
Subject: [PATCH 08/14] Check if automerge label is set

---
 .circleci/config.yml | 6 ++----
 1 file changed, 2 insertions(+), 4 deletions(-)

diff --git a/.circleci/config.yml b/.circleci/config.yml
index dac0be7ab22..cf472ab8b37 100644
--- a/.circleci/config.yml
+++ b/.circleci/config.yml
@@ -162,10 +162,8 @@ jobs:
             if [ "${CIRCLE_BRANCH}" != "master" ]; then
               PR_URL="$CIRCLE_PULL_REQUEST"
               PR_NUMBER=$(echo $PR_URL | awk -F'/' '{print $NF}')
-              IS_DRAFT=$(curl "https://api.github.com/repos/scalableminds/webknossos/pulls/${PR_NUMBER}" | jq '.draft')
-                if [ "$IS_DRAFT" == "true" ]; then
-                    echo "PR is a draft, not installing dev deployment"
-                else
+              SHOULD_AUTOMERGE=$(curl "https://api.github.com/repos/scalableminds/webknossos/pulls/${PR_NUMBER}" | jq -e '.labels | .[] | select(.name == "autodeploy")')
+                if [ "$SHOULD_AUTOMERGE" == "true" ]; then
                     curl -X POST -H "X-Auth-Token: $RELEASE_API_TOKEN" "https://kubernetix.scm.io/hooks/install/webknossos/dev/${CIRCLE_BRANCH}?user=CI+%28nightly%29"
                     echo "\nInstalled to $NORMALIZED_BRANCH.webknossos.xyz"
                 fi

From c23f1a95815f09f48612bc1be643560611813603 Mon Sep 17 00:00:00 2001
From: frcroth <frcroth@gmail.com>
Date: Mon, 18 Mar 2024 10:46:26 +0100
Subject: [PATCH 09/14] Do we have a GH Token?

---
 .circleci/config.yml | 15 +++++++++++++++
 1 file changed, 15 insertions(+)

diff --git a/.circleci/config.yml b/.circleci/config.yml
index cf472ab8b37..c063d7af55d 100644
--- a/.circleci/config.yml
+++ b/.circleci/config.yml
@@ -24,6 +24,21 @@ jobs:
               echo "export NORMALIZED_BRANCH=master" >> $BASH_ENV
               echo "export DOCKER_TAG=${CIRCLE_TAG}" >> $BASH_ENV
             fi
+      - run:
+          name: Test GH Token
+          command: |
+            if [ -n "$GH_TOKEN" ]; then
+              echo "GH_TOKEN is set"
+              sudo mkdir -p -m 755 /etc/apt/keyrings && wget -qO- https://cli.github.com/packages/githubcli-archive-keyring.gpg | sudo tee /etc/apt/keyrings/githubcli-archive-keyring.gpg > /dev/null \
+              && sudo chmod go+r /etc/apt/keyrings/githubcli-archive-keyring.gpg \
+              && echo "deb [arch=$(dpkg --print-architecture) signed-by=/etc/apt/keyrings/githubcli-archive-keyring.gpg] https://cli.github.com/packages stable main" | sudo tee /etc/apt/sources.list.d/github-cli.list > /dev/null \
+              && sudo apt update \
+              && sudo apt install gh -y
+              gh auth status
+            else
+              echo "GH_TOKEN is not set"
+              exit 1
+            fi
       - run:
           name: Build webknossos-dev docker image
           command: |

From 37057a333261e18b17c80cba63eb6686616f8827 Mon Sep 17 00:00:00 2001
From: frcroth <frcroth@gmail.com>
Date: Mon, 18 Mar 2024 14:10:59 +0100
Subject: [PATCH 10/14] Update comment

---
 .circleci/config.yml | 31 ++++++++++++++-----------------
 1 file changed, 14 insertions(+), 17 deletions(-)

diff --git a/.circleci/config.yml b/.circleci/config.yml
index c063d7af55d..e0c57e5b33c 100644
--- a/.circleci/config.yml
+++ b/.circleci/config.yml
@@ -24,21 +24,6 @@ jobs:
               echo "export NORMALIZED_BRANCH=master" >> $BASH_ENV
               echo "export DOCKER_TAG=${CIRCLE_TAG}" >> $BASH_ENV
             fi
-      - run:
-          name: Test GH Token
-          command: |
-            if [ -n "$GH_TOKEN" ]; then
-              echo "GH_TOKEN is set"
-              sudo mkdir -p -m 755 /etc/apt/keyrings && wget -qO- https://cli.github.com/packages/githubcli-archive-keyring.gpg | sudo tee /etc/apt/keyrings/githubcli-archive-keyring.gpg > /dev/null \
-              && sudo chmod go+r /etc/apt/keyrings/githubcli-archive-keyring.gpg \
-              && echo "deb [arch=$(dpkg --print-architecture) signed-by=/etc/apt/keyrings/githubcli-archive-keyring.gpg] https://cli.github.com/packages stable main" | sudo tee /etc/apt/sources.list.d/github-cli.list > /dev/null \
-              && sudo apt update \
-              && sudo apt install gh -y
-              gh auth status
-            else
-              echo "GH_TOKEN is not set"
-              exit 1
-            fi
       - run:
           name: Build webknossos-dev docker image
           command: |
@@ -177,10 +162,22 @@ jobs:
             if [ "${CIRCLE_BRANCH}" != "master" ]; then
               PR_URL="$CIRCLE_PULL_REQUEST"
               PR_NUMBER=$(echo $PR_URL | awk -F'/' '{print $NF}')
-              SHOULD_AUTOMERGE=$(curl "https://api.github.com/repos/scalableminds/webknossos/pulls/${PR_NUMBER}" | jq -e '.labels | .[] | select(.name == "autodeploy")')
-                if [ "$SHOULD_AUTOMERGE" == "true" ]; then
+              SHOULD_AUTODEPLOY=$(curl "https://api.github.com/repos/scalableminds/webknossos/pulls/${PR_NUMBER}" | jq -e '.labels | .[] | select(.name == "autodeploy")')
+                if [ "SHOULD_AUTODEPLOY" == "true" ]; then
                     curl -X POST -H "X-Auth-Token: $RELEASE_API_TOKEN" "https://kubernetix.scm.io/hooks/install/webknossos/dev/${CIRCLE_BRANCH}?user=CI+%28nightly%29"
                     echo "\nInstalled to $NORMALIZED_BRANCH.webknossos.xyz"
+
+                    # Install gh client
+                    sudo mkdir -p -m 755 /etc/apt/keyrings && wget -qO- https://cli.github.com/packages/githubcli-archive-keyring.gpg | sudo tee /etc/apt/keyrings/githubcli-archive-keyring.gpg > /dev/null \
+                    && sudo chmod go+r /etc/apt/keyrings/githubcli-archive-keyring.gpg \
+                    && echo "deb [arch=$(dpkg --print-architecture) signed-by=/etc/apt/keyrings/githubcli-archive-keyring.gpg] https://cli.github.com/packages stable main" | sudo tee /etc/apt/sources.list.d/github-cli.list > /dev/null \
+                    && sudo apt update \
+                    && sudo apt install gh -y
+                    gh auth status
+
+                    CURRENT_BODY = $(gh pr view $PR_NUMBER --json body | jq -r '.body')
+                    UPDATED_BODY = $(echo $CURRENT_BODY | sed "s|https://___.webknossos.xyz|https://$NORMALIZED_BRANCH.webknossos.xyz|g")
+                    gh pr edit $PR_NUMBER --body $UPDATED_BODY
                 fi
             fi
       - run:

From 1d333db6cdef02af29a51fe414bf2d820fc77842 Mon Sep 17 00:00:00 2001
From: frcroth <frcroth@gmail.com>
Date: Mon, 18 Mar 2024 14:27:45 +0100
Subject: [PATCH 11/14] Add more echos

---
 .circleci/config.yml | 4 ++++
 1 file changed, 4 insertions(+)

diff --git a/.circleci/config.yml b/.circleci/config.yml
index e0c57e5b33c..73d4a90b290 100644
--- a/.circleci/config.yml
+++ b/.circleci/config.yml
@@ -163,6 +163,7 @@ jobs:
               PR_URL="$CIRCLE_PULL_REQUEST"
               PR_NUMBER=$(echo $PR_URL | awk -F'/' '{print $NF}')
               SHOULD_AUTODEPLOY=$(curl "https://api.github.com/repos/scalableminds/webknossos/pulls/${PR_NUMBER}" | jq -e '.labels | .[] | select(.name == "autodeploy")')
+              echo "SHOULD_AUTODEPLOY=$SHOULD_AUTODEPLOY"
                 if [ "SHOULD_AUTODEPLOY" == "true" ]; then
                     curl -X POST -H "X-Auth-Token: $RELEASE_API_TOKEN" "https://kubernetix.scm.io/hooks/install/webknossos/dev/${CIRCLE_BRANCH}?user=CI+%28nightly%29"
                     echo "\nInstalled to $NORMALIZED_BRANCH.webknossos.xyz"
@@ -176,7 +177,10 @@ jobs:
                     gh auth status
 
                     CURRENT_BODY = $(gh pr view $PR_NUMBER --json body | jq -r '.body')
+                    echo "CURRENT_BODY=$CURRENT_BODY"
                     UPDATED_BODY = $(echo $CURRENT_BODY | sed "s|https://___.webknossos.xyz|https://$NORMALIZED_BRANCH.webknossos.xyz|g")
+                    echo "UPDATED_BODY=$UPDATED_BODY"
+
                     gh pr edit $PR_NUMBER --body $UPDATED_BODY
                 fi
             fi

From 0878b50faf55743bacaa91ed0c8140402c09f991 Mon Sep 17 00:00:00 2001
From: frcroth <frcroth@gmail.com>
Date: Mon, 18 Mar 2024 14:48:22 +0100
Subject: [PATCH 12/14] Fix check

---
 .circleci/config.yml | 35 ++++++++++++++++++-----------------
 1 file changed, 18 insertions(+), 17 deletions(-)

diff --git a/.circleci/config.yml b/.circleci/config.yml
index 73d4a90b290..a4ab64ca200 100644
--- a/.circleci/config.yml
+++ b/.circleci/config.yml
@@ -163,26 +163,27 @@ jobs:
               PR_URL="$CIRCLE_PULL_REQUEST"
               PR_NUMBER=$(echo $PR_URL | awk -F'/' '{print $NF}')
               SHOULD_AUTODEPLOY=$(curl "https://api.github.com/repos/scalableminds/webknossos/pulls/${PR_NUMBER}" | jq -e '.labels | .[] | select(.name == "autodeploy")')
-              echo "SHOULD_AUTODEPLOY=$SHOULD_AUTODEPLOY"
-                if [ "SHOULD_AUTODEPLOY" == "true" ]; then
-                    curl -X POST -H "X-Auth-Token: $RELEASE_API_TOKEN" "https://kubernetix.scm.io/hooks/install/webknossos/dev/${CIRCLE_BRANCH}?user=CI+%28nightly%29"
-                    echo "\nInstalled to $NORMALIZED_BRANCH.webknossos.xyz"
+              if [ "$?" -eq "0" ]
+                then
+                  echo "Starting autodeploy"
+                  curl -X POST -H "X-Auth-Token: $RELEASE_API_TOKEN" "https://kubernetix.scm.io/hooks/install/webknossos/dev/${CIRCLE_BRANCH}?user=CI+%28nightly%29"
+                  echo "\nInstalled to $NORMALIZED_BRANCH.webknossos.xyz"
 
-                    # Install gh client
-                    sudo mkdir -p -m 755 /etc/apt/keyrings && wget -qO- https://cli.github.com/packages/githubcli-archive-keyring.gpg | sudo tee /etc/apt/keyrings/githubcli-archive-keyring.gpg > /dev/null \
-                    && sudo chmod go+r /etc/apt/keyrings/githubcli-archive-keyring.gpg \
-                    && echo "deb [arch=$(dpkg --print-architecture) signed-by=/etc/apt/keyrings/githubcli-archive-keyring.gpg] https://cli.github.com/packages stable main" | sudo tee /etc/apt/sources.list.d/github-cli.list > /dev/null \
-                    && sudo apt update \
-                    && sudo apt install gh -y
-                    gh auth status
+                  # Install gh client
+                  sudo mkdir -p -m 755 /etc/apt/keyrings && wget -qO- https://cli.github.com/packages/githubcli-archive-keyring.gpg | sudo tee /etc/apt/keyrings/githubcli-archive-keyring.gpg > /dev/null \
+                  && sudo chmod go+r /etc/apt/keyrings/githubcli-archive-keyring.gpg \
+                  && echo "deb [arch=$(dpkg --print-architecture) signed-by=/etc/apt/keyrings/githubcli-archive-keyring.gpg] https://cli.github.com/packages stable main" | sudo tee /etc/apt/sources.list.d/github-cli.list > /dev/null \
+                  && sudo apt update \
+                  && sudo apt install gh -y
+                  gh auth status
 
-                    CURRENT_BODY = $(gh pr view $PR_NUMBER --json body | jq -r '.body')
-                    echo "CURRENT_BODY=$CURRENT_BODY"
-                    UPDATED_BODY = $(echo $CURRENT_BODY | sed "s|https://___.webknossos.xyz|https://$NORMALIZED_BRANCH.webknossos.xyz|g")
-                    echo "UPDATED_BODY=$UPDATED_BODY"
+                  CURRENT_BODY = $(gh pr view $PR_NUMBER --json body | jq -r '.body')
+                  echo "CURRENT_BODY=$CURRENT_BODY"
+                  UPDATED_BODY = $(echo $CURRENT_BODY | sed "s|https://___.webknossos.xyz|https://$NORMALIZED_BRANCH.webknossos.xyz|g")
+                  echo "UPDATED_BODY=$UPDATED_BODY"
 
-                    gh pr edit $PR_NUMBER --body $UPDATED_BODY
-                fi
+                  gh pr edit $PR_NUMBER --body $UPDATED_BODY
+              fi
             fi
       - run:
           name: Send Slack notification (master only)

From e432d88aa03df9deaf0d45aeb39eaa6377f22ffe Mon Sep 17 00:00:00 2001
From: frcroth <frcroth@gmail.com>
Date: Mon, 18 Mar 2024 17:02:27 +0100
Subject: [PATCH 13/14] Remove spaces because bash is madness

---
 .circleci/config.yml | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/.circleci/config.yml b/.circleci/config.yml
index a4ab64ca200..69e538c75ef 100644
--- a/.circleci/config.yml
+++ b/.circleci/config.yml
@@ -177,9 +177,9 @@ jobs:
                   && sudo apt install gh -y
                   gh auth status
 
-                  CURRENT_BODY = $(gh pr view $PR_NUMBER --json body | jq -r '.body')
+                  CURRENT_BODY=$(gh pr view $PR_NUMBER --json body | jq -r '.body')
                   echo "CURRENT_BODY=$CURRENT_BODY"
-                  UPDATED_BODY = $(echo $CURRENT_BODY | sed "s|https://___.webknossos.xyz|https://$NORMALIZED_BRANCH.webknossos.xyz|g")
+                  UPDATED_BODY=$(echo $CURRENT_BODY | sed "s|https://___.webknossos.xyz|https://$NORMALIZED_BRANCH.webknossos.xyz|g")
                   echo "UPDATED_BODY=$UPDATED_BODY"
 
                   gh pr edit $PR_NUMBER --body $UPDATED_BODY

From 48766bd975e7f90aabe4c529b2135026156a391d Mon Sep 17 00:00:00 2001
From: frcroth <frcroth@gmail.com>
Date: Mon, 18 Mar 2024 17:16:21 +0100
Subject: [PATCH 14/14] Fix body input

---
 .circleci/config.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.circleci/config.yml b/.circleci/config.yml
index 69e538c75ef..5e26d257465 100644
--- a/.circleci/config.yml
+++ b/.circleci/config.yml
@@ -182,7 +182,7 @@ jobs:
                   UPDATED_BODY=$(echo $CURRENT_BODY | sed "s|https://___.webknossos.xyz|https://$NORMALIZED_BRANCH.webknossos.xyz|g")
                   echo "UPDATED_BODY=$UPDATED_BODY"
 
-                  gh pr edit $PR_NUMBER --body $UPDATED_BODY
+                  echo $UPDATED_BODY | gh pr edit $PR_NUMBER -F -
               fi
             fi
       - run: