From 002ca5ea4dbc6b4499605a41a7fecca1d3bda642 Mon Sep 17 00:00:00 2001 From: Philipp Otto Date: Thu, 24 Nov 2022 17:40:26 +0100 Subject: [PATCH] Release 22.12.0 --- CHANGELOG.released.md | 36 ++++++++++++++++++++++++++++++++++++ CHANGELOG.unreleased.md | 31 ++----------------------------- MIGRATIONS.released.md | 11 ++++++++++- MIGRATIONS.unreleased.md | 2 +- 4 files changed, 49 insertions(+), 31 deletions(-) diff --git a/CHANGELOG.released.md b/CHANGELOG.released.md index 7a14607fc93..0ae2d65caf1 100644 --- a/CHANGELOG.released.md +++ b/CHANGELOG.released.md @@ -7,6 +7,42 @@ The format is based on [Keep a Changelog](http://keepachangelog.com/en/1.0.0/) and this project adheres to [Calendar Versioning](http://calver.org/) `0Y.0M.MICRO`. For upgrade instructions, please check the [migration guide](MIGRATIONS.released.md). +## [22.12.0](https://github.com/scalableminds/webknossos/releases/tag/22.12.0) - 2022-11-24 +[Commits](https://github.com/scalableminds/webknossos/compare/22.11.2...22.12.0) + +### Highlights +- Added a new Quick-Select tool for volume annotation. This tools allows to draw a rectangle over a segment to annotate it automatically. The tool operates on the intensity data of the visible color layer and automatically fills out the segment starting from the center of the rectangle. Next to the tool, there is a settings button which allows to enable a preview mode and to tweak some other parameters. If the preview is enabled, the parameters can be fine-tuned while the preview updates instantly. [#6542](https://github.com/scalableminds/webknossos/pull/6542) +- The scale bar is now included in screenshots of the viewports made using the `Q` shortcut or the "Screenshot" menu entry. If the scale bar should not be included, disable it using "Settings - Viewport Options - Show Scalebars". [#6644](https://github.com/scalableminds/webknossos/pull/6644) + +### Added +- The largest segment id for a segmentation layer can be computed automatically from the dataset settings page. [#6415](https://github.com/scalableminds/webknossos/pull/6415) +- Button for switching organizations for Voxelytics workflows. [#6572](https://github.com/scalableminds/webknossos/pull/6572) +- Added ability to shuffle / set colors for a whole tree group. [#6586](https://github.com/scalableminds/webknossos/pull/6586) +- Annotation layers can now be removed. [#6593](https://github.com/scalableminds/webknossos/pull/6593) +- When adding remote Zarr datasets with multiple channels, channels are converted into layers. [#6609](https://github.com/scalableminds/webknossos/pull/6609) +- When adding a remote OME-NGFF dataset with labels, these are added as segmentation layers. [#6638](https://github.com/scalableminds/webknossos/pull/6638) +- When creating an annotation from the dataset view, a previously selected mapping of the segmentation layer is now automatically selected in the volume annotation layer fallback segmentation as well. [#6647](https://github.com/scalableminds/webknossos/pull/6647) + +### Changed +- The log viewer in the Voxelytics workflow reporting now uses a virtualized list. [#6579](https://github.com/scalableminds/webknossos/pull/6579) +- Node positions are always handled as integers. They have always been persisted as integers by the server, anyway, but the session in which a node was created handled the position as floating point in earlier versions. [#6589](https://github.com/scalableminds/webknossos/pull/6589) +- Jobs can no longer be started on datastores without workers. [#6595](https://github.com/scalableminds/webknossos/pull/6595) +- When downloading volume annotations with volume data skipped, the nml volume tag is now included anyway (but has no location attribute in this case). [#6566](https://github.com/scalableminds/webknossos/pull/6566) +- Re-phrased some backend (error) messages to improve clarity and provide helping hints. [#6616](https://github.com/scalableminds/webknossos/pull/6616) +- The layer visibility is now encoded in the sharing link. The user opening the link will see the same layers that were visible when copying the link. [#6634](https://github.com/scalableminds/webknossos/pull/6634) +- Voxelytics workflows can now be viewed by anyone with the link who is in the right organization. [#6622](https://github.com/scalableminds/webknossos/pull/6622) +- Improve performance for handling of volume annotation data (saving/undo/redo). [#6652](https://github.com/scalableminds/webknossos/pull/6652) +- When importing an annotation into an existing annotation, webKnossos ensures that bounding boxes are not duplicated in case they exist in the current *and* imported annotation. [#6648](https://github.com/scalableminds/webknossos/pull/6648) +- Reworked the proofreading mode so that agglomerate skeletons are no longer needed (nor automatically loaded). Instead, segments can be selected by left-clicking onto them, indicated by a small white cross. To merge or split agglomerates, then either use the shortcuts `Shift + Leftclick`/`Ctrl + Leftclick` or use the context menu. [#6625](https://github.com/scalableminds/webknossos/pull/6625) + +### Fixed +- Fixed a bug in the dataset import view, where the layer name text field would lose focus after each key press. [#6615](https://github.com/scalableminds/webknossos/pull/6615) +- Fixed importing NGFF Zarr datasets with non-scale transforms. [#6621](https://github.com/scalableminds/webknossos/pull/6621) +- Fixed a regression in NGFF Zarr import for datasets with no channel axis. [#6636](https://github.com/scalableminds/webknossos/pull/6636) +- Fixed broken creation of tasks using base NMLs. [#6634](https://github.com/scalableminds/webknossos/pull/6634) +- Fixed that the precomputation of meshes didn't take the active mapping into account. [#6651](https://github.com/scalableminds/webknossos/pull/6651) +- Fixed false-positive warning about an outdated annotation version. [#6656](https://github.com/scalableminds/webknossos/pull/6656) + ## [22.11.2](https://github.com/scalableminds/webknossos/releases/tag/22.11.2) - 2022-11-10 [Commits](https://github.com/scalableminds/webknossos/compare/22.11.1...22.11.2) diff --git a/CHANGELOG.unreleased.md b/CHANGELOG.unreleased.md index ba5fa3887ba..ca9fbe78342 100644 --- a/CHANGELOG.unreleased.md +++ b/CHANGELOG.unreleased.md @@ -8,40 +8,13 @@ and this project adheres to [Calendar Versioning](http://calver.org/) `0Y.0M.MIC For upgrade instructions, please check the [migration guide](MIGRATIONS.released.md). ## Unreleased -[Commits](https://github.com/scalableminds/webknossos/compare/22.11.2...HEAD) +[Commits](https://github.com/scalableminds/webknossos/compare/22.12.0...HEAD) ### Added -- Added a new Quick-Select tool for volume annotation. This tools allows to draw a rectangle over a segment to annotate it automatically. The tool operates on the intensity data of the visible color layer and automatically fills out the segment starting from the center of the rectangle. Next to the tool, there is a settings button which allows to enable a preview mode and to tweak some other parameters. If the preview is enabled, the parameters can be fine-tuned while the preview updates instantly. [#6542](https://github.com/scalableminds/webknossos/pull/6542) -- The largest segment id for a segmentation layer can be computed automatically from the dataset settings page. [#6415](https://github.com/scalableminds/webknossos/pull/6415) -- Button for switching organizations for Voxelytics workflows. [#6572](https://github.com/scalableminds/webknossos/pull/6572) -- Added ability to shuffle / set colors for a whole tree group. [#6586](https://github.com/scalableminds/webknossos/pull/6586) -- Annotation layers can now be removed. [#6593](https://github.com/scalableminds/webknossos/pull/6593) -- When adding remote Zarr datasets with multiple channels, channels are converted into layers. [#6609](https://github.com/scalableminds/webknossos/pull/6609) -- When adding a remote OME-NGFF dataset with labels, these are added as segmentation layers. [#6638](https://github.com/scalableminds/webknossos/pull/6638) -- The scale bar is now included in screenshots of the viewports made using the `Q` shortcut or the "Screenshot" menu entry. If the scale bar should not be included, disable it using "Settings - Viewport Options - Show Scalebars". [#6644](https://github.com/scalableminds/webknossos/pull/6644) -- When creating an annotation from the dataset view, a previously selected mapping of the segmentation layer is now automatically selected in the volume annotation layer fallback segmentation as well. [#6647](https://github.com/scalableminds/webknossos/pull/6647) ### Changed -- The log viewer in the Voxelytics workflow reporting now uses a virtualized list. [#6579](https://github.com/scalableminds/webknossos/pull/6579) -- Node positions are always handled as integers. They have always been persisted as integers by the server, anyway, but the session in which a node was created handled the position as floating point in earlier versions. [#6589](https://github.com/scalableminds/webknossos/pull/6589) -- Jobs can no longer be started on datastores without workers. [#6595](https://github.com/scalableminds/webknossos/pull/6595) -- When downloading volume annotations with volume data skipped, the nml volume tag is now included anyway (but has no location attribute in this case). [#6566](https://github.com/scalableminds/webknossos/pull/6566) -- Re-phrased some backend (error) messages to improve clarity and provide helping hints. [#6616](https://github.com/scalableminds/webknossos/pull/6616) -- The layer visibility is now encoded in the sharing link. The user opening the link will see the same layers that were visible when copying the link. [#6634](https://github.com/scalableminds/webknossos/pull/6634) -- Voxelytics workflows can now be viewed by anyone with the link who is in the right organization. [#6622](https://github.com/scalableminds/webknossos/pull/6622) -- Improve performance for handling of volume annotation data (saving/undo/redo). [#6652](https://github.com/scalableminds/webknossos/pull/6652) -- When importing an annotation into an existing annotation, webKnossos ensures that bounding boxes are not duplicated in case they exist in the current *and* imported annotation. [#6648](https://github.com/scalableminds/webknossos/pull/6648) -- Reworked the proofreading mode so that agglomerate skeletons are no longer needed (nor automatically loaded). Instead, segments can be selected by left-clicking onto them, indicated by a small white cross. To merge or split agglomerates, then either use the shortcuts `Shift + Leftclick`/`Ctrl + Leftclick` or use the context menu. [#6625](https://github.com/scalableminds/webknossos/pull/6625) - + ### Fixed -- Fixed a bug in the dataset import view, where the layer name text field would lose focus after each key press. [#6615](https://github.com/scalableminds/webknossos/pull/6615) -- Fixed importing NGFF Zarr datasets with non-scale transforms. [#6621](https://github.com/scalableminds/webknossos/pull/6621) -- Fixed a regression in NGFF Zarr import for datasets with no channel axis. [#6636](https://github.com/scalableminds/webknossos/pull/6636) -- Fixed broken creation of tasks using base NMLs. [#6634](https://github.com/scalableminds/webknossos/pull/6634) -- Fixed a regression in NGFF Zarr import for datasets with no channel axis. [#6636](https://github.com/scalableminds/webknossos/pull/6636 -- Fixed broken creation of tasks using base NMLs. [#6634](https://github.com/scalableminds/webknossos/pull/6634) -- Fixed that the precomputation of meshes didn't take the active mapping into account. [#6651](https://github.com/scalableminds/webknossos/pull/6651) -- Fixed false-positive warning about an outdated annotation version. [#6656](https://github.com/scalableminds/webknossos/pull/6656) ### Removed diff --git a/MIGRATIONS.released.md b/MIGRATIONS.released.md index bfaa71e2845..425942be990 100644 --- a/MIGRATIONS.released.md +++ b/MIGRATIONS.released.md @@ -5,16 +5,25 @@ See `MIGRATIONS.unreleased.md` for the changes which are not yet part of an offi This project adheres to [Calendar Versioning](http://calver.org/) `0Y.0M.MICRO`. User-facing changes are documented in the [changelog](CHANGELOG.released.md). +## [22.12.0](https://github.com/scalableminds/webknossos/releases/tag/22.12.0) - 2022-11-24 +[Commits](https://github.com/scalableminds/webknossos/compare/22.11.2...22.12.0) + +### Postgres Evolutions: +None. + + ## [22.11.2](https://github.com/scalableminds/webknossos/releases/tag/22.11.2) - 2022-11-10 [Commits](https://github.com/scalableminds/webknossos/compare/22.11.1...22.11.2) ### Postgres Evolutions: +None. ## [22.11.1](https://github.com/scalableminds/webknossos/releases/tag/22.11.1) - 2022-10-27 [Commits](https://github.com/scalableminds/webknossos/compare/22.11.0...22.11.1) ### Postgres Evolutions: +None. ## [22.11.0](https://github.com/scalableminds/webknossos/releases/tag/22.11.0) - 2022-10-24 @@ -476,4 +485,4 @@ No migrations necessary. ## [18.07.0](https://github.com/scalableminds/webknossos/releases/tag/18.07.0) - 2018-07-05 -First release \ No newline at end of file +First release diff --git a/MIGRATIONS.unreleased.md b/MIGRATIONS.unreleased.md index 88834f8eccd..21b79d4ce6f 100644 --- a/MIGRATIONS.unreleased.md +++ b/MIGRATIONS.unreleased.md @@ -6,6 +6,6 @@ This project adheres to [Calendar Versioning](http://calver.org/) `0Y.0M.MICRO`. User-facing changes are documented in the [changelog](CHANGELOG.released.md). ## Unreleased -[Commits](https://github.com/scalableminds/webknossos/compare/22.11.2...HEAD) +[Commits](https://github.com/scalableminds/webknossos/compare/22.12.0...HEAD) ### Postgres Evolutions: