Makefile.imac

#------ GNU g++ -----------------------------------------------------

GCC         = clang
CPPFLAGS    = -I/users/seb/.local/include -Iinclude -O2 -fPIC

LINKER      = clang
LDFLAGS     = -L/users/seb/.local/lib -lboost_program_options-mt -lboost_system-mt -lboost_thread-mt -O2 -lstdc++

RCPPFLAGS   = -I/usr/local/R-3.0.1/lib64/R/include -DNDEBUG
RLDFLAGS    = -L/usr/local/R/lib64

#--------------------------------------------------------------------

MAKEDEPEND  = makedepend
DEPENDFLAGS = -m 

#--------------------------------------------------------------------

EXEC        = tsir
OBJECTS     = src/simulation.o src/gravity_model.o \
		src/param_container.o src/city_calculator.o src/pearson.o \
                src/getseed.o
#--------------------------------------------------------------------

all:  bin/$(EXEC) src/tsir.so

bin/$(EXEC): $(OBJECTS) src/tsir.o
	@echo ... linking:
	$(LINKER) src/tsir.o $(OBJECTS) $(LDFLAGS) $(OPTFLAGS) $(CPPFLAGS) -o $@
	@echo

src/%.o: src/%.cpp
	@echo ... compiling $<:	
	$(GCC) -c $(CPPFLAGS) $(OPTFLAGS) -o $@ -MMD -MP -MF $(patsubst src/%.o, src/.%.d, $@) $<
	@echo

src/tsir.so: bin/tsir
	@echo ... building R package
	PKG_CXXFLAGS="$(CPPFLAGS)" R CMD INSTALL .
	@echo

DEPS = $(patsubst src/%.o, src/.%.d, $(OBJECTS)) src/.tsir.d src/.rcpp_tsir.d

ifneq ($(MAKECMDGOALS),clean)
-include $(DEPS)
endif   

htmldoc:
	doxygen

pdfdoc: htmldoc
	$(MAKE) -C doc/latex pdf

clean:
	@echo ... cleaning
	@rm -f src/*.o src/.*.d bin/* lib/*
	@echo ... done

cleaner:
	@echo '... cleaning also *~'
	@rm -f bin/* src/*.o *~ .#*
	@echo ... done