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PROBE data generation

  1. Insert PROBE data parameters into generate_data_configuration.py
  • size: top region size
  • sub_sizes_train: subregion sizes for training data
  • sub_sizes_test: subregion sizes for testing data
  • counts: number of subregions
  • loc_comb: number of subregion location combinations
  • k1: cell swap counts for the whole region
  • k2: cell swap counts for each subregion

  1. Run generate_data_configuration.py for job_file generation
  • Command: python generate_data_configuration.py
  • Output files
    • train_job_file
    • test_job_file
  1. Source the job_file in the LINUX shell or submit it using GNU parallel