diff --git a/Makefile b/Makefile
index 44c929e..162c3c5 100644
--- a/Makefile
+++ b/Makefile
@@ -1,5 +1,5 @@
 IMAGE ?= rstudio/r-system-requirements
-VARIANTS ?= focal jammy noble bookworm sid centos7 centos8 rockylinux8 rockylinux9 rockylinux10 opensuse156 fedora41 alpine-3.19 alpine-3.20 alpine-3.21 alpine-edge
+VARIANTS ?= focal jammy noble bookworm trixie sid centos7 centos8 rockylinux8 rockylinux9 rockylinux10 opensuse156 fedora41 alpine-3.19 alpine-3.20 alpine-3.21 alpine-edge
 
 RULES ?= rules/*.json
 
diff --git a/README.md b/README.md
index 3a0e0af..d9d55ff 100644
--- a/README.md
+++ b/README.md
@@ -52,7 +52,7 @@ The rules in this catalog support the following operating systems:
 - Red Hat Enterprise Linux 7, 8, 9
 - openSUSE 15.6
 - SUSE Linux Enterprise 15 SP6
-- Debian 12, unstable
+- Debian 12, 13, unstable
 - Fedora 41
 - Windows (for R 4.0-4.1 only)
 
diff --git a/docker/trixie/Dockerfile b/docker/trixie/Dockerfile
new file mode 100644
index 0000000..fd4b4aa
--- /dev/null
+++ b/docker/trixie/Dockerfile
@@ -0,0 +1,8 @@
+FROM debian:13
+
+RUN apt-get update -qq && \
+    DEBIAN_FRONTEND=noninteractive apt-get install -y curl
+
+# Install jq
+RUN curl -fsSL -o /usr/local/bin/jq https://github.com/jqlang/jq/releases/download/jq-1.8.1/jq-linux-amd64 && \
+    chmod +x /usr/local/bin/jq
diff --git a/rules/gdal.json b/rules/gdal.json
index d24a128..ac453ec 100644
--- a/rules/gdal.json
+++ b/rules/gdal.json
@@ -138,35 +138,20 @@
       "packages": ["gdal-devel", "gdal"],
       "pre_install": [
         { "command": "dnf install -y dnf-plugins-core" },
-        { "command": "dnf config-manager --set-enabled crb" },
-        { "command": "dnf install -y epel-release" }
+        { "command": "dnf config-manager --set-enabled crb" }
       ],
       "constraints": [
         {
           "os": "linux",
           "distribution": "rockylinux",
-          "versions": ["9"]
-        }
-      ]
-    },
-    {
-      "packages": ["gdal-devel", "gdal"],
-      "pre_install": [
-        { "command": "dnf install -y epel-release" }
-      ],
-      "constraints": [
-        {
-          "os": "linux",
-          "distribution": "rockylinux",
-          "versions": ["10"]
+          "versions": ["9", "10"]
         }
       ]
     },
     {
       "packages": ["gdal-devel", "gdal"],
       "pre_install": [
-        { "command": "subscription-manager repos --enable codeready-builder-for-rhel-9-$(arch)-rpms" },
-        { "command": "dnf install -y https://dl.fedoraproject.org/pub/epel/epel-release-latest-9.noarch.rpm" }
+        { "command": "subscription-manager repos --enable codeready-builder-for-rhel-9-$(arch)-rpms" }
       ],
       "constraints": [
         {
@@ -179,7 +164,7 @@
     {
       "packages": ["gdal-devel", "gdal"],
       "pre_install": [
-        { "command": "dnf install -y https://dl.fedoraproject.org/pub/epel/epel-release-latest-10.noarch.rpm" }
+        { "command": "subscription-manager repos --enable codeready-builder-for-rhel-10-$(arch)-rpms" }
       ],
       "constraints": [
         {
diff --git a/rules/geos.json b/rules/geos.json
index ff8b2ba..7e74e98 100644
--- a/rules/geos.json
+++ b/rules/geos.json
@@ -77,7 +77,7 @@
     {
       "packages": ["geos-devel"],
       "pre_install": [
-        { "command": "dnf install -y https://dl.fedoraproject.org/pub/epel/epel-release-latest-9.noarch.rpm" }
+        { "command": "subscription-manager repos --enable codeready-builder-for-rhel-9-$(arch)-rpms" }
       ],
       "constraints": [
         {
@@ -90,7 +90,7 @@
     {
       "packages": ["geos-devel"],
       "pre_install": [
-        { "command": "dnf install -y https://dl.fedoraproject.org/pub/epel/epel-release-latest-10.noarch.rpm" }
+        { "command": "subscription-manager repos --enable codeready-builder-for-rhel-10-$(arch)-rpms" }
       ],
       "constraints": [
         {
@@ -127,10 +127,21 @@
           "os": "linux",
           "distribution": "centos",
           "versions": ["8"]
-        },
+        }
+      ]
+    },
+    {
+      "packages": ["geos-devel"],
+      "pre_install": [
+        { "command": "dnf install -y dnf-plugins-core" },
+        { "command": "dnf config-manager --set-enabled crb" },
+        { "command": "dnf install -y epel-release" }
+      ],
+      "constraints": [
         {
           "os": "linux",
-          "distribution": "rockylinux"
+          "distribution": "rockylinux",
+          "versions": ["9", "10"]
         }
       ]
     },
diff --git a/rules/proj.json b/rules/proj.json
index 1502bab..3204d18 100644
--- a/rules/proj.json
+++ b/rules/proj.json
@@ -50,10 +50,20 @@
           "os": "linux",
           "distribution": "centos",
           "versions": ["8"]
-        },
+        }
+      ]
+    },
+    {
+      "packages": ["proj-devel"],
+      "pre_install": [
+        { "command": "dnf install -y dnf-plugins-core" },
+        { "command": "dnf config-manager --set-enabled crb" }
+      ],
+      "constraints": [
         {
           "os": "linux",
-          "distribution": "rockylinux"
+          "distribution": "rockylinux",
+          "versions": ["9", "10"]
         }
       ]
     },
@@ -105,7 +115,7 @@
     {
       "packages": ["proj-devel"],
       "pre_install": [
-        { "command": "dnf install -y https://dl.fedoraproject.org/pub/epel/epel-release-latest-9.noarch.rpm" }
+        { "command": "subscription-manager repos --enable codeready-builder-for-rhel-9-$(arch)-rpms" }
       ],
       "constraints": [
         {
@@ -118,7 +128,7 @@
     {
       "packages": ["proj-devel"],
       "pre_install": [
-        { "command": "dnf install -y https://dl.fedoraproject.org/pub/epel/epel-release-latest-10.noarch.rpm" }
+        { "command": "subscription-manager repos --enable codeready-builder-for-rhel-10-$(arch)-rpms" }
       ],
       "constraints": [
         {
diff --git a/schema.json b/schema.json
index b8b2a21..5718f2e 100644
--- a/schema.json
+++ b/schema.json
@@ -138,7 +138,7 @@
         "enum": [ "6", "7", "8" ]
       },
       "debian": {
-        "enum": [ "10", "11", "12", "unstable" ]
+        "enum": [ "10", "11", "12", "13", "unstable" ]
       },
       "fedora": {
         "enum": [ "36", "37", "38", "39", "40", "41" ]
diff --git a/systems.json b/systems.json
index 31f5a8b..db4a092 100644
--- a/systems.json
+++ b/systems.json
@@ -2,7 +2,7 @@
     {
         "os": "linux",
         "distribution": "debian",
-        "versions": [ "10", "11", "12", "unstable" ]
+        "versions": [ "10", "11", "12", "13", "unstable" ]
     },
     {
         "os": "linux",
diff --git a/test/sysreqs.json b/test/sysreqs.json
index cc5d65c..fdd9779 100644
--- a/test/sysreqs.json
+++ b/test/sysreqs.json
@@ -6,7 +6,7 @@
   },
   {
     "Package": "abn",
-    "Version": "3.1.9",
+    "Version": "3.1.12",
     "SystemRequirements": "pkg-config, cmake, gsl, jpeg, gdal, geos, proj, udunits-2, openssl, libcurl, jags"
   },
   {
@@ -16,8 +16,8 @@
   },
   {
     "Package": "acro",
-    "Version": "0.1.5",
-    "SystemRequirements": "Python (>= 3.9)"
+    "Version": "0.1.6",
+    "SystemRequirements": "Python (>= 3.10)"
   },
   {
     "Package": "adaHuber",
@@ -31,12 +31,12 @@
   },
   {
     "Package": "adbcpostgresql",
-    "Version": "0.20.0",
+    "Version": "0.21.0",
     "SystemRequirements": "libpq"
   },
   {
     "Package": "adbcsqlite",
-    "Version": "0.20.0",
+    "Version": "0.21.0",
     "SystemRequirements": "SQLite3"
   },
   {
@@ -51,8 +51,8 @@
   },
   {
     "Package": "admixr",
-    "Version": "0.9.1",
-    "SystemRequirements": "ADMIXTOOLS suite of command-line utilities for population genetics. See <https://reich.hms.harvard.edu/software> for the most recent installation instructions and further information."
+    "Version": "0.9.2",
+    "SystemRequirements": "ADMIXTOOLS suite of command-line utilities for population genetics. See <https://github.com/dreichlab/admixtools> for the most recent installation instructions and further information."
   },
   {
     "Package": "AFR",
@@ -71,7 +71,7 @@
   },
   {
     "Package": "aifeducation",
-    "Version": "1.1.1",
+    "Version": "1.1.3",
     "SystemRequirements": "PyTorch (see vignette \"Get started\")"
   },
   {
@@ -91,7 +91,7 @@
   },
   {
     "Package": "altmeta",
-    "Version": "4.2",
+    "Version": "4.3",
     "SystemRequirements": "JAGS 4.x.y (http://mcmc-jags.sourceforge.net)"
   },
   {
@@ -99,6 +99,11 @@
     "Version": "1.0.2",
     "SystemRequirements": "C++11"
   },
+  {
+    "Package": "amsSim",
+    "Version": "0.1.0",
+    "SystemRequirements": "C++17"
+  },
   {
     "Package": "AncestryMapper",
     "Version": "2.0",
@@ -111,12 +116,12 @@
   },
   {
     "Package": "ANN2",
-    "Version": "2.3.4",
-    "SystemRequirements": "C++11"
+    "Version": "2.4.0",
+    "SystemRequirements": "C++17"
   },
   {
     "Package": "anticlust",
-    "Version": "0.8.10-1",
+    "Version": "0.8.13",
     "SystemRequirements": "Rendering the vignette requires pandoc (<https://pandoc.org/>)."
   },
   {
@@ -129,6 +134,11 @@
     "Version": "1.8.0",
     "SystemRequirements": "'Apache Spark' 3.x"
   },
+  {
+    "Package": "apathe",
+    "Version": "0.1.0",
+    "SystemRequirements": "Rendering the document template requires pandoc (>= 2.0; https://pandoc.org) and for PDFs a TeX distribution, such as TinyTeX (>= 0.12; https://yihui.org/tinytex/)"
+  },
   {
     "Package": "apcf",
     "Version": "0.3.2",
@@ -156,7 +166,7 @@
   },
   {
     "Package": "arcgisgeocode",
-    "Version": "0.3.0",
+    "Version": "0.4.0",
     "SystemRequirements": "Cargo (Rust's package manager), rustc >= 1.67, xz"
   },
   {
@@ -176,7 +186,7 @@
   },
   {
     "Package": "arcpbf",
-    "Version": "0.1.7",
+    "Version": "0.2.0",
     "SystemRequirements": "Cargo (Rust's package manager), rustc >= 1.70"
   },
   {
@@ -186,7 +196,7 @@
   },
   {
     "Package": "argparse",
-    "Version": "2.2.5",
+    "Version": "2.3.1",
     "SystemRequirements": "python (>= 3.2)"
   },
   {
@@ -201,8 +211,8 @@
   },
   {
     "Package": "arrow",
-    "Version": "21.0.0.1",
-    "SystemRequirements": "C++17; for AWS S3 support on Linux, libcurl and openssl (optional); cmake >= 3.25 (build-time only, and only for full source build)"
+    "Version": "22.0.0",
+    "SystemRequirements": "C++17; for AWS S3 support on Linux, libcurl and openssl (optional); cmake >= 3.26 (build-time only, and only for full source build)"
   },
   {
     "Package": "artma",
@@ -211,7 +221,7 @@
   },
   {
     "Package": "arulesCBA",
-    "Version": "1.2.8",
+    "Version": "1.2.9",
     "SystemRequirements": "Java (>= 8)"
   },
   {
@@ -221,17 +231,17 @@
   },
   {
     "Package": "asbio",
-    "Version": "1.11",
+    "Version": "1.12-1",
     "SystemRequirements": "BWidget"
   },
   {
     "Package": "asremlPlus",
-    "Version": "4.4.51",
+    "Version": "4.4.55",
     "SystemRequirements": "asreml"
   },
   {
     "Package": "asteRisk",
-    "Version": "1.4.4",
+    "Version": "1.4.5",
     "SystemRequirements": "GNU make"
   },
   {
@@ -241,7 +251,7 @@
   },
   {
     "Package": "autoharp",
-    "Version": "0.0.12",
+    "Version": "0.0.13",
     "SystemRequirements": "pandoc (>= 1.14) - http://pandoc.org"
   },
   {
@@ -249,9 +259,14 @@
     "Version": "0.0.9",
     "SystemRequirements": "Quarto command line tools (https://github.com/quarto-dev/quarto-cli)."
   },
+  {
+    "Package": "autotab",
+    "Version": "0.1.1",
+    "SystemRequirements": "Python (>= 3.8); TensorFlow (>= 2.10); Keras; TensorFlow Addons"
+  },
   {
     "Package": "av",
-    "Version": "0.9.5",
+    "Version": "0.9.6",
     "SystemRequirements": "FFmpeg (>= 3.2); with at least libx264 and lame (mp3) drivers. MacOS Homebrew: ffmpeg. Debian/Ubuntu: libavfilter-dev. Fedora/RHEL: either ffmpeg-devel from https://rpmfusion.org (preferred), or libavfilter-free-devel which is a more limited version available on Fedora/EPEL9."
   },
   {
@@ -294,11 +309,6 @@
     "Version": "1.0.0",
     "SystemRequirements": "JAGS 4.x.y (http://mcmc-jags.sourceforge.net)"
   },
-  {
-    "Package": "baker",
-    "Version": "1.0.3",
-    "SystemRequirements": "JAGS (>= 4.3.2) (http://mcmc-jags.sourceforge.net)"
-  },
   {
     "Package": "bakR",
     "Version": "1.0.1",
@@ -306,7 +316,7 @@
   },
   {
     "Package": "baldur",
-    "Version": "0.0.3",
+    "Version": "0.0.4",
     "SystemRequirements": "GNU make"
   },
   {
@@ -324,11 +334,6 @@
     "Version": "1.0-2",
     "SystemRequirements": "C++17"
   },
-  {
-    "Package": "BANOVA",
-    "Version": "1.2.1",
-    "SystemRequirements": "JAGS-4.3.0, C++11"
-  },
   {
     "Package": "bartMachine",
     "Version": "1.3.4.1",
@@ -404,11 +409,6 @@
     "Version": "0.0.1.5",
     "SystemRequirements": "GNU make"
   },
-  {
-    "Package": "bayeslm",
-    "Version": "1.0.1",
-    "SystemRequirements": "GNU make"
-  },
   {
     "Package": "bayesplot",
     "Version": "1.14.0",
@@ -419,6 +419,11 @@
     "Version": "0.4.0",
     "SystemRequirements": "JAGS (http://mcmc-jags.sourceforge.io)"
   },
+  {
+    "Package": "bayesQRsurvey",
+    "Version": "0.1.4",
+    "SystemRequirements": "BLAS, LAPACK"
+  },
   {
     "Package": "BayesSenMC",
     "Version": "0.1.5",
@@ -426,7 +431,7 @@
   },
   {
     "Package": "BayesSUR",
-    "Version": "2.3-0",
+    "Version": "2.3-1",
     "SystemRequirements": "C++17"
   },
   {
@@ -451,7 +456,7 @@
   },
   {
     "Package": "BayLum",
-    "Version": "0.3.2",
+    "Version": "0.3.3",
     "SystemRequirements": "JAGS >= 4.3.2 (https://mcmc-jags.sourceforge.io/)"
   },
   {
@@ -511,7 +516,7 @@
   },
   {
     "Package": "BeeGUTS",
-    "Version": "1.3.0",
+    "Version": "1.4.0",
     "SystemRequirements": "GNU make"
   },
   {
@@ -524,14 +529,9 @@
     "Version": "0.0.2.2",
     "SystemRequirements": "GNU make"
   },
-  {
-    "Package": "benchr",
-    "Version": "0.2.5",
-    "SystemRequirements": "C++11"
-  },
   {
     "Package": "bennu",
-    "Version": "0.3.1",
+    "Version": "0.3.2",
     "SystemRequirements": "GNU make"
   },
   {
@@ -584,6 +584,11 @@
     "Version": "0.1.3",
     "SystemRequirements": "GNU make, pandoc (>=1.12.3, needed for vignettes)"
   },
+  {
+    "Package": "BigDataStatMeth",
+    "Version": "1.0.2",
+    "SystemRequirements": "GNU make, C++17"
+  },
   {
     "Package": "bigGP",
     "Version": "0.1.9",
@@ -594,6 +599,16 @@
     "Version": "2.3.1",
     "SystemRequirements": "GNU make"
   },
+  {
+    "Package": "bigPLScox",
+    "Version": "0.8.1",
+    "SystemRequirements": "C++17"
+  },
+  {
+    "Package": "bigPLSR",
+    "Version": "0.7.2",
+    "SystemRequirements": "C++17, Optional CBLAS (detected at compile time)"
+  },
   {
     "Package": "bigrquerystorage",
     "Version": "1.2.2",
@@ -616,8 +631,8 @@
   },
   {
     "Package": "bioacoustics",
-    "Version": "0.2.8",
-    "SystemRequirements": "C++11, fftw3, GNU make"
+    "Version": "0.2.10",
+    "SystemRequirements": "fftw3, GNU make"
   },
   {
     "Package": "BioCro",
@@ -626,7 +641,7 @@
   },
   {
     "Package": "bioimagetools",
-    "Version": "1.1.8",
+    "Version": "1.1.9",
     "SystemRequirements": "tiff fftw libcurl openssl"
   },
   {
@@ -646,7 +661,7 @@
   },
   {
     "Package": "bistablehistory",
-    "Version": "1.1.2",
+    "Version": "1.1.3",
     "SystemRequirements": "GNU make"
   },
   {
@@ -676,7 +691,7 @@
   },
   {
     "Package": "blavaan",
-    "Version": "0.5-8",
+    "Version": "0.5-9",
     "SystemRequirements": "GNU make"
   },
   {
@@ -691,12 +706,12 @@
   },
   {
     "Package": "blogdown",
-    "Version": "1.21",
+    "Version": "1.22",
     "SystemRequirements": "Hugo (<https://gohugo.io>) and Pandoc (<https://pandoc.org>)"
   },
   {
     "Package": "blosc",
-    "Version": "0.1.1",
+    "Version": "0.1.2",
     "SystemRequirements": "blosc: blosc-devel (rpm) or libblosc-dev (deb)"
   },
   {
@@ -731,7 +746,7 @@
   },
   {
     "Package": "bookdown",
-    "Version": "0.44",
+    "Version": "0.45",
     "SystemRequirements": "Pandoc (>= 1.17.2)"
   },
   {
@@ -739,6 +754,11 @@
     "Version": "0.9.16",
     "SystemRequirements": "GNU Make"
   },
+  {
+    "Package": "bootStateSpace",
+    "Version": "1.0.3",
+    "SystemRequirements": "GNU GSL (>= 2.5)"
+  },
   {
     "Package": "bootUR",
     "Version": "1.0.4",
@@ -749,11 +769,6 @@
     "Version": "0.4.1",
     "SystemRequirements": "Python and boto3 (https://aws.amazon.com/sdk-for-python)"
   },
-  {
-    "Package": "bpgmm",
-    "Version": "1.0.9",
-    "SystemRequirements": "C++11"
-  },
   {
     "Package": "BPrinStratTTE",
     "Version": "0.0.7",
@@ -761,7 +776,7 @@
   },
   {
     "Package": "breathtestcore",
-    "Version": "0.8.9",
+    "Version": "0.8.10",
     "SystemRequirements": "pandoc"
   },
   {
@@ -786,7 +801,7 @@
   },
   {
     "Package": "BSPBSS",
-    "Version": "1.0.5",
+    "Version": "1.0.6",
     "SystemRequirements": "GNU make"
   },
   {
@@ -801,7 +816,7 @@
   },
   {
     "Package": "bsub",
-    "Version": "1.1.0",
+    "Version": "2.0.6",
     "SystemRequirements": "Platform LSF, bsub"
   },
   {
@@ -826,7 +841,7 @@
   },
   {
     "Package": "Cairo",
-    "Version": "1.6-5",
+    "Version": "1.7-0",
     "SystemRequirements": "cairo (>= 1.2 http://www.cairographics.org/)"
   },
   {
@@ -836,7 +851,7 @@
   },
   {
     "Package": "camtrapR",
-    "Version": "2.3.1",
+    "Version": "3.0.0",
     "SystemRequirements": "ExifTool (https://exiftool.org/)"
   },
   {
@@ -866,8 +881,8 @@
   },
   {
     "Package": "catSurv",
-    "Version": "1.5.0",
-    "SystemRequirements": "C++11, GNU make"
+    "Version": "1.6.0",
+    "SystemRequirements": "GNU make"
   },
   {
     "Package": "causact",
@@ -881,7 +896,7 @@
   },
   {
     "Package": "caviarpd",
-    "Version": "0.3.20",
+    "Version": "0.3.21",
     "SystemRequirements": "Cargo (Rust's package manager), rustc (>= 1.77.2)"
   },
   {
@@ -894,6 +909,16 @@
     "Version": "1.0.5",
     "SystemRequirements": "Java (>= 7.0)"
   },
+  {
+    "Package": "changepointGA",
+    "Version": "0.1.3",
+    "SystemRequirements": "C++17"
+  },
+  {
+    "Package": "cheapr",
+    "Version": "1.4.0",
+    "SystemRequirements": "C++17"
+  },
   {
     "Package": "chicane",
     "Version": "0.1.8",
@@ -916,7 +941,7 @@
   },
   {
     "Package": "ciflyr",
-    "Version": "0.1.1",
+    "Version": "0.1.2",
     "SystemRequirements": "Cargo (Rust's package manager), rustc"
   },
   {
@@ -984,11 +1009,6 @@
     "Version": "0.9.9",
     "SystemRequirements": "ZeroMQ (libzmq) >= 4.3.0 (optional; otherwise bundled)"
   },
-  {
-    "Package": "ClusterR",
-    "Version": "1.3.4",
-    "SystemRequirements": "libarmadillo: apt-get install -y libarmadillo-dev (deb), libblas: apt-get install -y libblas-dev (deb), liblapack: apt-get install -y liblapack-dev (deb), libarpack++2: apt-get install -y libarpack++2-dev (deb), gfortran: apt-get install -y gfortran (deb), libgmp3: apt-get install -y libgmp3-dev (deb), libfftw3: apt-get install -y libfftw3-dev (deb), libtiff5: apt-get install -y libtiff5-dev (deb)"
-  },
   {
     "Package": "clustTMB",
     "Version": "0.1.0",
@@ -996,7 +1016,7 @@
   },
   {
     "Package": "CLVTools",
-    "Version": "0.12.0",
+    "Version": "0.12.1",
     "SystemRequirements": "GNU GSL"
   },
   {
@@ -1041,12 +1061,12 @@
   },
   {
     "Package": "Colossus",
-    "Version": "1.3.0",
-    "SystemRequirements": "make"
+    "Version": "1.4.3",
+    "SystemRequirements": "make, C++17"
   },
   {
     "Package": "colourvalues",
-    "Version": "0.3.9",
+    "Version": "0.3.11",
     "SystemRequirements": "C++17"
   },
   {
@@ -1076,7 +1096,7 @@
   },
   {
     "Package": "concaveman",
-    "Version": "1.1.0",
+    "Version": "1.2.0",
     "SystemRequirements": "GDAL (>= 2.0.0), GEOS (>= 3.3.0), PROJ.4 (>= 4.8.0)"
   },
   {
@@ -1186,8 +1206,8 @@
   },
   {
     "Package": "cppRouting",
-    "Version": "3.1",
-    "SystemRequirements": "GNU make, C++11"
+    "Version": "3.2",
+    "SystemRequirements": "GNU make"
   },
   {
     "Package": "cppSim",
@@ -1219,6 +1239,11 @@
     "Version": "0.1-22",
     "SystemRequirements": "Java (>= 5.0)"
   },
+  {
+    "Package": "cTMed",
+    "Version": "1.0.8",
+    "SystemRequirements": "GNU GSL (>= 2.5)"
+  },
   {
     "Package": "ctsem",
     "Version": "3.10.4",
@@ -1231,7 +1256,7 @@
   },
   {
     "Package": "cubature",
-    "Version": "2.1.4",
+    "Version": "2.1.4-1",
     "SystemRequirements": "GNU make and USE_C17"
   },
   {
@@ -1311,8 +1336,8 @@
   },
   {
     "Package": "DataVisualizations",
-    "Version": "1.3.5",
-    "SystemRequirements": "GNU make"
+    "Version": "1.4.0",
+    "SystemRequirements": "GNU make, C++17"
   },
   {
     "Package": "datefixR",
@@ -1349,20 +1374,20 @@
     "Version": "0.1.5",
     "SystemRequirements": "C++11"
   },
-  {
-    "Package": "decido",
-    "Version": "0.3.0",
-    "SystemRequirements": "C++11"
-  },
   {
     "Package": "Deducer",
-    "Version": "0.9-0",
+    "Version": "0.9-1",
     "SystemRequirements": "Java, JRI"
   },
+  {
+    "Package": "deepspat",
+    "Version": "0.3.1",
+    "SystemRequirements": "TensorFlow (https://www.tensorflow.org/),"
+  },
   {
     "Package": "deforestable",
-    "Version": "3.1.1",
-    "SystemRequirements": "C++11, GDAL (>= 2.2.3), GEOS (>= 3.4.0), PROJ (>= 4.9.3), sqlite3"
+    "Version": "3.1.2",
+    "SystemRequirements": "GDAL (>= 2.2.3), GEOS (>= 3.4.0), PROJ (>= 4.9.3), sqlite3"
   },
   {
     "Package": "deformula",
@@ -1385,9 +1410,9 @@
     "SystemRequirements": "GNU make"
   },
   {
-    "Package": "DepthProc",
-    "Version": "2.1.5",
-    "SystemRequirements": "C++11"
+    "Package": "DER",
+    "Version": "1.3",
+    "SystemRequirements": "GNU make"
   },
   {
     "Package": "DescTools",
@@ -1411,8 +1436,8 @@
   },
   {
     "Package": "devianLM",
-    "Version": "1.0.3",
-    "SystemRequirements": "OpenMP"
+    "Version": "1.0.7",
+    "SystemRequirements": "OpenMP (optional, for parallel execution)"
   },
   {
     "Package": "dialr",
@@ -1431,7 +1456,7 @@
   },
   {
     "Package": "DiNAMIC.Duo",
-    "Version": "1.0.3",
+    "Version": "1.0.4",
     "SystemRequirements": "Python, NumPy Python library"
   },
   {
@@ -1489,11 +1514,6 @@
     "Version": "1.1.0",
     "SystemRequirements": "C++11"
   },
-  {
-    "Package": "DLSSM",
-    "Version": "1.1.1",
-    "SystemRequirements": "Intel MKL (optional for enhanced performance)"
-  },
   {
     "Package": "DNAtools",
     "Version": "0.2-4",
@@ -1566,7 +1586,7 @@
   },
   {
     "Package": "duckdb",
-    "Version": "1.4.0",
+    "Version": "1.4.2",
     "SystemRequirements": "xz (for building from source)"
   },
   {
@@ -1579,6 +1599,11 @@
     "Version": "0.1.5",
     "SystemRequirements": "Dynare, Octave"
   },
+  {
+    "Package": "dynaSpec",
+    "Version": "1.0.5",
+    "SystemRequirements": "ffmpeg"
+  },
   {
     "Package": "dynatop",
     "Version": "0.2.3",
@@ -1649,11 +1674,6 @@
     "Version": "4.2.0",
     "SystemRequirements": "C++17"
   },
-  {
-    "Package": "edgemodelr",
-    "Version": "0.1.0",
-    "SystemRequirements": "C++17, GNU make or equivalent for building"
-  },
   {
     "Package": "eDMA",
     "Version": "1.5-4",
@@ -1696,7 +1716,7 @@
   },
   {
     "Package": "elliptic",
-    "Version": "1.5-0",
+    "Version": "1.5-1",
     "SystemRequirements": "pari/gp"
   },
   {
@@ -1729,6 +1749,11 @@
     "Version": "1.7.1",
     "SystemRequirements": "GNU make C++17"
   },
+  {
+    "Package": "EpiPvr",
+    "Version": "0.0.1",
+    "SystemRequirements": "GNU make"
+  },
   {
     "Package": "EpiSignalDetection",
     "Version": "0.1.2",
@@ -1741,7 +1766,7 @@
   },
   {
     "Package": "Epoch",
-    "Version": "1.0.3",
+    "Version": "1.0.7",
     "SystemRequirements": "GNU make"
   },
   {
@@ -1766,7 +1791,7 @@
   },
   {
     "Package": "EvidenceSynthesis",
-    "Version": "1.0.0",
+    "Version": "1.1.0",
     "SystemRequirements": "Java (>= 8)"
   },
   {
@@ -1781,7 +1806,7 @@
   },
   {
     "Package": "exactextractr",
-    "Version": "0.10.0",
+    "Version": "0.10.1",
     "SystemRequirements": "GEOS (>= 3.5.0)"
   },
   {
@@ -1789,16 +1814,16 @@
     "Version": "2.4-2",
     "SystemRequirements": "pandoc (>= 2.0)"
   },
+  {
+    "Package": "excerptr",
+    "Version": "2.1.0",
+    "SystemRequirements": "Python (>= 3.0.0)"
+  },
   {
     "Package": "excursions",
     "Version": "2.5.8",
     "SystemRequirements": "Gnu Scientific Library version >= 2.1"
   },
-  {
-    "Package": "exif",
-    "Version": "0.1.0",
-    "SystemRequirements": "C++11"
-  },
   {
     "Package": "exifr",
     "Version": "0.3.2",
@@ -1839,6 +1864,16 @@
     "Version": "1.0.6",
     "SystemRequirements": "ProtoBuf libraries and compiler version 3.3.0 or later; On Debian/Ubuntu these can be installed as libprotoc-dev, libprotobuf-dev and protobuf-compiler, while on Fedora/CentOS protobuf-devel and protobuf-compiler are needed."
   },
+  {
+    "Package": "fairGATE",
+    "Version": "0.1.0",
+    "SystemRequirements": "Optional 'LibTorch' backend; install via torch::install_torch()."
+  },
+  {
+    "Package": "fairGNN",
+    "Version": "0.1.0",
+    "SystemRequirements": "Optional 'LibTorch' backend; install via torch::install_torch()."
+  },
   {
     "Package": "fangs",
     "Version": "0.2.21",
@@ -1861,7 +1896,7 @@
   },
   {
     "Package": "fasterRaster",
-    "Version": "8.4.1.0",
+    "Version": "8.4.1.1",
     "SystemRequirements": "GRASS (>= 8)"
   },
   {
@@ -1886,24 +1921,19 @@
   },
   {
     "Package": "FastKRR",
-    "Version": "0.1.0",
+    "Version": "0.1.2",
     "SystemRequirements": "OpenMP (optional)"
   },
+  {
+    "Package": "fastplyr",
+    "Version": "0.9.91",
+    "SystemRequirements": "C++17"
+  },
   {
     "Package": "fastText",
     "Version": "1.0.4",
     "SystemRequirements": "Generally, fastText builds on modern Mac OS and Linux distributions. Since it uses some C++11 features, it requires a compiler with good C++11 support. These include a (g++-4.7.2 or newer) or a (clang-3.3 or newer)."
   },
-  {
-    "Package": "fastTopics",
-    "Version": "0.6-192",
-    "SystemRequirements": "GNU make"
-  },
-  {
-    "Package": "fcci",
-    "Version": "1.0.1",
-    "SystemRequirements": "C++11"
-  },
   {
     "Package": "fcirt",
     "Version": "0.2.1",
@@ -1916,7 +1946,7 @@
   },
   {
     "Package": "FCPS",
-    "Version": "1.3.4",
+    "Version": "1.3.5",
     "SystemRequirements": "Pandoc (>= 1.12.3)"
   },
   {
@@ -1996,12 +2026,12 @@
   },
   {
     "Package": "flint",
-    "Version": "0.1.0",
+    "Version": "0.1.2",
     "SystemRequirements": "flint (>= 3), mpfr (>= 3.1), gmp"
   },
   {
     "Package": "FLORAL",
-    "Version": "0.5.0",
+    "Version": "0.6.0",
     "SystemRequirements": "C++17"
   },
   {
@@ -2030,9 +2060,9 @@
     "SystemRequirements": "C++17"
   },
   {
-    "Package": "fmf",
-    "Version": "1.1.1",
-    "SystemRequirements": "libarmadillo: apt-get install -y libarmadillo-dev (deb), libblas: apt-get install -y libblas-dev (deb), liblapack: apt-get install -y liblapack-dev (deb), libarpack++2: apt-get install -y libarpack++2-dev (deb), gfortran: apt-get install -y gfortran (deb)"
+    "Package": "fmriAR",
+    "Version": "0.2.0",
+    "SystemRequirements": "OpenMP (optional)"
   },
   {
     "Package": "fmrihrf",
@@ -2059,11 +2089,6 @@
     "Version": "0.1.0",
     "SystemRequirements": "GNU make, OpenMP, TBB"
   },
-  {
-    "Package": "fracture",
-    "Version": "0.2.1",
-    "SystemRequirements": "C++11"
-  },
   {
     "Package": "freesurfer",
     "Version": "1.8.1",
@@ -2119,9 +2144,14 @@
     "Version": "1.0.0",
     "SystemRequirements": "XQuartz (https://www.xquartz.org/)"
   },
+  {
+    "Package": "funbootband",
+    "Version": "0.2.0",
+    "SystemRequirements": "C++17"
+  },
   {
     "Package": "funMoDisco",
-    "Version": "1.0.0",
+    "Version": "1.1.0",
     "SystemRequirements": "C++20"
   },
   {
@@ -2146,7 +2176,7 @@
   },
   {
     "Package": "galamm",
-    "Version": "0.2.3",
+    "Version": "0.3.0",
     "SystemRequirements": "C++17"
   },
   {
@@ -2186,17 +2216,17 @@
   },
   {
     "Package": "gdalcubes",
-    "Version": "0.7.1",
+    "Version": "0.7.2",
     "SystemRequirements": "GDAL (>= 2.0.1), PROJ (>= 4.8.0), netcdf, sqlite3"
   },
   {
     "Package": "gdalraster",
-    "Version": "2.2.1",
+    "Version": "2.3.0",
     "SystemRequirements": "C++17, GDAL (>= 3.1.0, built against GEOS)"
   },
   {
     "Package": "gdtools",
-    "Version": "0.4.3",
+    "Version": "0.4.4",
     "SystemRequirements": "cairo, freetype2, fontconfig"
   },
   {
@@ -2205,14 +2235,14 @@
     "SystemRequirements": "GNU make, pandoc (>=1.12.3, needed for vignettes)"
   },
   {
-    "Package": "GeneralizedWendland",
-    "Version": "0.6.0",
-    "SystemRequirements": "gsl (>= 2.7)"
+    "Package": "GeneralizedUmatrixGPU",
+    "Version": "0.1.8",
+    "SystemRequirements": "GNU make, pandoc (>=1.12.3, needed for vignettes), OpenCL shared library (provided by an SDK such as AMD/NVIDIA)"
   },
   {
-    "Package": "genie",
-    "Version": "1.0.5",
-    "SystemRequirements": "OpenMP, C++11"
+    "Package": "GeneralizedWendland",
+    "Version": "0.6.1",
+    "SystemRequirements": "gsl (>= 2.7)"
   },
   {
     "Package": "genieclust",
@@ -2231,7 +2261,7 @@
   },
   {
     "Package": "geoarrow",
-    "Version": "0.4.0",
+    "Version": "0.4.1",
     "SystemRequirements": "C++17"
   },
   {
@@ -2249,11 +2279,6 @@
     "Version": "1.1.2",
     "SystemRequirements": "libarmadillo: apt-get install -y libarmadillo-dev (deb)"
   },
-  {
-    "Package": "geojsonsf",
-    "Version": "2.0.3",
-    "SystemRequirements": "C++11"
-  },
   {
     "Package": "GeoMongo",
     "Version": "1.0.3",
@@ -2264,9 +2289,14 @@
     "Version": "0.8.2",
     "SystemRequirements": "GNU make"
   },
+  {
+    "Package": "GerminaR",
+    "Version": "2.1.6",
+    "SystemRequirements": "pandoc"
+  },
   {
     "Package": "gert",
-    "Version": "2.1.5",
+    "Version": "2.2.0",
     "SystemRequirements": "libgit2 (>= 1.0): libgit2-devel (rpm) or libgit2-dev (deb)"
   },
   {
@@ -2276,7 +2306,7 @@
   },
   {
     "Package": "GetoptLong",
-    "Version": "1.0.5",
+    "Version": "1.1.0",
     "SystemRequirements": "Perl, Getopt::Long"
   },
   {
@@ -2306,7 +2336,7 @@
   },
   {
     "Package": "ggiraph",
-    "Version": "0.9.1",
+    "Version": "0.9.2",
     "SystemRequirements": "libpng"
   },
   {
@@ -2321,7 +2351,7 @@
   },
   {
     "Package": "ggseg",
-    "Version": "1.6.5",
+    "Version": "1.6.7",
     "SystemRequirements": "C++11, GDAL (>= 2.0.1), GEOS (>= 3.4.0), PROJ (>= 4.8.0)"
   },
   {
@@ -2386,7 +2416,7 @@
   },
   {
     "Package": "glmmrBase",
-    "Version": "1.0.2",
+    "Version": "1.1.0",
     "SystemRequirements": "GNU make"
   },
   {
@@ -2396,7 +2426,7 @@
   },
   {
     "Package": "glmmTMB",
-    "Version": "1.1.12",
+    "Version": "1.1.13",
     "SystemRequirements": "GNU make"
   },
   {
@@ -2461,24 +2491,14 @@
   },
   {
     "Package": "gpboost",
-    "Version": "1.6.2",
+    "Version": "1.6.4",
     "SystemRequirements": "C++17"
   },
-  {
-    "Package": "gppm",
-    "Version": "0.3.0",
-    "SystemRequirements": "GNU make"
-  },
   {
     "Package": "GPTCM",
-    "Version": "1.1.1",
+    "Version": "1.1.3",
     "SystemRequirements": "C++17"
   },
-  {
-    "Package": "gpuR",
-    "Version": "2.0.6",
-    "SystemRequirements": "C++11 (supporting at least std=c++0x), OpenCL shared library (provided by an SDK such as AMD/NVIDIA) and OpenCL headers including the C++ header file (provided by Khronos if not by SDK)"
-  },
   {
     "Package": "gravmagsubs",
     "Version": "1.0.1",
@@ -2506,7 +2526,7 @@
   },
   {
     "Package": "grf",
-    "Version": "2.4.0",
+    "Version": "2.5.0",
     "SystemRequirements": "GNU make"
   },
   {
@@ -2531,17 +2551,17 @@
   },
   {
     "Package": "grwat",
-    "Version": "0.0.4",
+    "Version": "0.1",
     "SystemRequirements": "pandoc"
   },
   {
     "Package": "gsl",
-    "Version": "2.1-8",
+    "Version": "2.1-9",
     "SystemRequirements": "Gnu Scientific Library version >= 2.5"
   },
   {
     "Package": "gslnls",
-    "Version": "1.4.1",
+    "Version": "1.4.2",
     "SystemRequirements": "GSL (>= 2.3)"
   },
   {
@@ -2621,7 +2641,7 @@
   },
   {
     "Package": "hdbayes",
-    "Version": "0.1.1",
+    "Version": "0.2.0",
     "SystemRequirements": "CmdStan (https://mc-stan.org/users/interfaces/cmdstan)"
   },
   {
@@ -2634,6 +2654,11 @@
     "Version": "0.6-2",
     "SystemRequirements": "HDFql (>= 2.1.0)"
   },
+  {
+    "Package": "hdtg",
+    "Version": "0.2.3",
+    "SystemRequirements": "CPU with AVX/SSE4.2 (optional for better performance)"
+  },
   {
     "Package": "heatindex",
     "Version": "0.0.2",
@@ -2671,7 +2696,7 @@
   },
   {
     "Package": "hgwrr",
-    "Version": "0.6-1",
+    "Version": "0.6-2",
     "SystemRequirements": "GNU make"
   },
   {
@@ -2681,17 +2706,17 @@
   },
   {
     "Package": "hicream",
-    "Version": "0.0.1",
+    "Version": "0.0.2",
     "SystemRequirements": "Python (>= 3.9)"
   },
   {
     "Package": "HighFive",
-    "Version": "3.1.0",
+    "Version": "3.2.0",
     "SystemRequirements": "C++14, hdf5"
   },
   {
     "Package": "highs",
-    "Version": "1.10.0-3",
+    "Version": "1.12.0-1",
     "SystemRequirements": "Bash, PkgConfig, CMAKE (>=3.16), C++17"
   },
   {
@@ -2711,7 +2736,7 @@
   },
   {
     "Package": "hmde",
-    "Version": "1.2.1",
+    "Version": "1.3",
     "SystemRequirements": "GNU make"
   },
   {
@@ -2749,9 +2774,14 @@
     "Version": "1.6.16",
     "SystemRequirements": "GNU make, zlib"
   },
+  {
+    "Package": "huito",
+    "Version": "0.2.6",
+    "SystemRequirements": "pandoc"
+  },
   {
     "Package": "huxtable",
-    "Version": "5.7.0",
+    "Version": "5.8.0",
     "SystemRequirements": "LaTeX packages: adjustbox, array, calc, caption, colortbl, fontspec, graphicx, hhline, hyperref, multirow, siunitx, tabularx, threeparttable, ulem, wrapfig"
   },
   {
@@ -2816,7 +2846,7 @@
   },
   {
     "Package": "igraph",
-    "Version": "2.1.4",
+    "Version": "2.2.1",
     "SystemRequirements": "libxml2 (optional), glpk (>= 4.57, optional)"
   },
   {
@@ -2856,7 +2886,7 @@
   },
   {
     "Package": "IncDTW",
-    "Version": "1.1.4.4",
+    "Version": "1.1.4.5",
     "SystemRequirements": "GNU make"
   },
   {
@@ -2889,9 +2919,19 @@
     "Version": "0.1.0",
     "SystemRequirements": "GNU make"
   },
+  {
+    "Package": "inTextSummaryTable",
+    "Version": "3.3.5",
+    "SystemRequirements": "pandoc (to export an interactive summary table to a file)"
+  },
+  {
+    "Package": "inti",
+    "Version": "0.6.9",
+    "SystemRequirements": "pandoc"
+  },
   {
     "Package": "IOHanalyzer",
-    "Version": "0.1.8.10",
+    "Version": "0.1.8.17",
     "SystemRequirements": "C++"
   },
   {
@@ -2929,11 +2969,6 @@
     "Version": "1.3.2",
     "SystemRequirements": "jupyter, jupyter_kernel_test (Python package for testing)"
   },
-  {
-    "Package": "ISEtools",
-    "Version": "3.2.0",
-    "SystemRequirements": "OpenBUGS (>=3.0) or JAGS (>=4.3.1)"
-  },
   {
     "Package": "isoband",
     "Version": "0.2.7",
@@ -2961,7 +2996,7 @@
   },
   {
     "Package": "jackalope",
-    "Version": "1.1.5",
+    "Version": "1.1.6",
     "SystemRequirements": "GNU make"
   },
   {
@@ -2986,7 +3021,7 @@
   },
   {
     "Package": "jfa",
-    "Version": "0.7.3",
+    "Version": "0.7.4",
     "SystemRequirements": "C++17, GNU make"
   },
   {
@@ -3001,18 +3036,13 @@
   },
   {
     "Package": "JMbayes",
-    "Version": "0.8-85",
+    "Version": "0.9-0",
     "SystemRequirements": "JAGS (http://mcmc-jags.sourceforge.net)"
   },
-  {
-    "Package": "jmcm",
-    "Version": "0.2.4",
-    "SystemRequirements": "C++11"
-  },
   {
     "Package": "jmotif",
-    "Version": "1.1.1",
-    "SystemRequirements": "C++11"
+    "Version": "1.2.0",
+    "SystemRequirements": "C++"
   },
   {
     "Package": "jmvconnect",
@@ -3036,14 +3066,9 @@
   },
   {
     "Package": "jSDM",
-    "Version": "0.2.6",
+    "Version": "0.2.7",
     "SystemRequirements": "GNU GSL"
   },
-  {
-    "Package": "jsonify",
-    "Version": "1.2.2",
-    "SystemRequirements": "C++11"
-  },
   {
     "Package": "juicr",
     "Version": "0.1",
@@ -3119,6 +3144,11 @@
     "Version": "2.0.2",
     "SystemRequirements": "fftw3 (>=3.3.4)"
   },
+  {
+    "Package": "KWCChangepoint",
+    "Version": "0.2.3",
+    "SystemRequirements": "C++17"
+  },
   {
     "Package": "kza",
     "Version": "4.1.0.1",
@@ -3191,7 +3221,7 @@
   },
   {
     "Package": "learnr",
-    "Version": "0.11.5",
+    "Version": "0.11.6",
     "SystemRequirements": "pandoc (>= 1.14) - http://pandoc.org"
   },
   {
@@ -3206,12 +3236,12 @@
   },
   {
     "Package": "lessSEM",
-    "Version": "1.5.6",
+    "Version": "1.5.7",
     "SystemRequirements": "GNU make, C++17"
   },
   {
     "Package": "lgpr",
-    "Version": "1.2.4",
+    "Version": "1.2.5",
     "SystemRequirements": "GNU make"
   },
   {
@@ -3221,12 +3251,12 @@
   },
   {
     "Package": "libimath",
-    "Version": "3.1.9-4",
+    "Version": "3.1.9-5",
     "SystemRequirements": "GNU Make, cmake"
   },
   {
     "Package": "libopenexr",
-    "Version": "3.4.0-4",
+    "Version": "3.4.0-5",
     "SystemRequirements": "CMake, GNU make"
   },
   {
@@ -3295,9 +3325,9 @@
     "SystemRequirements": "C++, GNU, GNU make, GSL"
   },
   {
-    "Package": "lobstr",
-    "Version": "1.1.2",
-    "SystemRequirements": "C++11"
+    "Package": "localLLM",
+    "Version": "1.0.1",
+    "SystemRequirements": "C++17, libcurl (optional, for model downloading)"
   },
   {
     "Package": "localsolver",
@@ -3309,11 +3339,6 @@
     "Version": "1.5-9.12",
     "SystemRequirements": "USE_C17"
   },
-  {
-    "Package": "logKDE",
-    "Version": "0.3.2",
-    "SystemRequirements": "C++11"
-  },
   {
     "Package": "LOMAR",
     "Version": "0.5.0",
@@ -3384,11 +3409,6 @@
     "Version": "1.3.0",
     "SystemRequirements": "java"
   },
-  {
-    "Package": "manifold",
-    "Version": "0.1.1",
-    "SystemRequirements": "C++11"
-  },
   {
     "Package": "manipulate",
     "Version": "1.0.1",
@@ -3399,14 +3419,9 @@
     "Version": "0.6.2",
     "SystemRequirements": "Python 3.x with following modules: PyGMO, NumPy, and cloudpickle"
   },
-  {
-    "Package": "mapdeck",
-    "Version": "0.3.5",
-    "SystemRequirements": "C++14"
-  },
   {
     "Package": "mapme.biodiversity",
-    "Version": "0.9.4",
+    "Version": "0.9.5",
     "SystemRequirements": "GDAL (>= 3.7.0), PROJ (>= 4.8.0)"
   },
   {
@@ -3451,7 +3466,7 @@
   },
   {
     "Package": "matrixprofiler",
-    "Version": "0.1.9",
+    "Version": "0.1.10",
     "SystemRequirements": "GNU make"
   },
   {
@@ -3526,7 +3541,7 @@
   },
   {
     "Package": "memshare",
-    "Version": "1.0.2",
+    "Version": "1.0.3.1",
     "SystemRequirements": "C++17"
   },
   {
@@ -3611,7 +3626,7 @@
   },
   {
     "Package": "minimaxALT",
-    "Version": "1.0.1",
+    "Version": "1.0.2",
     "SystemRequirements": "GNU Scientific Library (GSL), OpenMP"
   },
   {
@@ -3646,7 +3661,7 @@
   },
   {
     "Package": "mlexperiments",
-    "Version": "0.0.7",
+    "Version": "0.0.8",
     "SystemRequirements": "Quarto command line tools (https://github.com/quarto-dev/quarto-cli)."
   },
   {
@@ -3674,16 +3689,16 @@
     "Version": "1.0.0",
     "SystemRequirements": "GNU make"
   },
-  {
-    "Package": "mmcif",
-    "Version": "0.1.1",
-    "SystemRequirements": "C++17"
-  },
   {
     "Package": "mmpca",
     "Version": "2.0.3",
     "SystemRequirements": "C++14"
   },
+  {
+    "Package": "MoBPS",
+    "Version": "1.13.1",
+    "SystemRequirements": "MiXBLUP (optional; used for multi-trait genomic evaluations); blupf90-family (optional; used for multi-trait genomic evaluations)"
+  },
   {
     "Package": "mod09nrt",
     "Version": "0.14",
@@ -3691,7 +3706,7 @@
   },
   {
     "Package": "modeLLtest",
-    "Version": "1.0.4",
+    "Version": "1.0.5",
     "SystemRequirements": "GNU make"
   },
   {
@@ -3706,7 +3721,7 @@
   },
   {
     "Package": "moocore",
-    "Version": "0.1.8",
+    "Version": "0.1.10",
     "SystemRequirements": "GNU make"
   },
   {
@@ -3766,7 +3781,7 @@
   },
   {
     "Package": "MSTest",
-    "Version": "0.1.5",
+    "Version": "0.1.6",
     "SystemRequirements": "C++17"
   },
   {
@@ -3796,7 +3811,7 @@
   },
   {
     "Package": "MultiscaleDTM",
-    "Version": "1.0",
+    "Version": "1.0.1",
     "SystemRequirements": "C++17"
   },
   {
@@ -3816,12 +3831,12 @@
   },
   {
     "Package": "mwa",
-    "Version": "0.4.4",
-    "SystemRequirements": "Java (>= 6.0)"
+    "Version": "0.5.0",
+    "SystemRequirements": "Java"
   },
   {
     "Package": "mwcsr",
-    "Version": "0.1.9",
+    "Version": "0.1.10",
     "SystemRequirements": "Java (>=8)"
   },
   {
@@ -3836,14 +3851,9 @@
   },
   {
     "Package": "nanonext",
-    "Version": "1.7.0",
+    "Version": "1.7.2",
     "SystemRequirements": "'libnng' >= 1.9 and 'libmbedtls' >= 2.5, or 'cmake' and 'xz' to compile NNG and/or Mbed TLS included in package sources"
   },
-  {
-    "Package": "narray",
-    "Version": "0.5.1",
-    "SystemRequirements": "C++11"
-  },
   {
     "Package": "navigation",
     "Version": "0.0.1",
@@ -3894,11 +3904,6 @@
     "Version": "1.3.2",
     "SystemRequirements": "NetMHC2pan (https://services.healthtech.dtu.dk/service.php?NetMHCIIpan-3.2)"
   },
-  {
-    "Package": "NetworkInference",
-    "Version": "1.2.4",
-    "SystemRequirements": "C++11"
-  },
   {
     "Package": "networkscaleup",
     "Version": "0.1-2",
@@ -3911,8 +3916,8 @@
   },
   {
     "Package": "neuralGAM",
-    "Version": "1.1.1",
-    "SystemRequirements": "python (>= 3.10), keras, tensorflow"
+    "Version": "2.0.0",
+    "SystemRequirements": "python (>= 3.10), keras (== 2.15), tensorflow (== 2.15)"
   },
   {
     "Package": "ngboostForecast",
@@ -3946,9 +3951,14 @@
   },
   {
     "Package": "nlrx",
-    "Version": "0.4.5",
+    "Version": "0.4.6",
     "SystemRequirements": "NetLogo (>= 5.3.1), Java (>= 11), pandoc, OpenSSL, udunits-2, PROJ.4, GEOS, GDAL, libxml2"
   },
+  {
+    "Package": "NMADTA",
+    "Version": "0.1.1",
+    "SystemRequirements": "JAGS 4.x.y (http://mcmc-jags.sourceforge.net)"
+  },
   {
     "Package": "nmslibR",
     "Version": "1.0.7",
@@ -3956,7 +3966,7 @@
   },
   {
     "Package": "NNS",
-    "Version": "11.5",
+    "Version": "11.6.3",
     "SystemRequirements": "GNU make"
   },
   {
@@ -3976,12 +3986,12 @@
   },
   {
     "Package": "nuggets",
-    "Version": "1.4.0",
+    "Version": "2.1.0",
     "SystemRequirements": "C++17"
   },
   {
     "Package": "numbat",
-    "Version": "1.4.2",
+    "Version": "1.5.1",
     "SystemRequirements": "GNU make"
   },
   {
@@ -3989,6 +3999,11 @@
     "Version": "1.2.1",
     "SystemRequirements": "JAGS (http://mcmc-jags.sourceforge.net)"
   },
+  {
+    "Package": "oceanmap",
+    "Version": "0.1.7",
+    "SystemRequirements": "ImageMagick"
+  },
   {
     "Package": "odbc",
     "Version": "1.6.3",
@@ -3999,6 +4014,11 @@
     "Version": "0.0.3",
     "SystemRequirements": "pandoc (>= 1.12.3), pandoc-citeproc"
   },
+  {
+    "Package": "odiffr",
+    "Version": "0.1.0",
+    "SystemRequirements": "odiff (>= 3.0.0) - https://github.com/dmtrKovalenko/odiff"
+  },
   {
     "Package": "officedown",
     "Version": "0.4.1",
@@ -4051,7 +4071,7 @@
   },
   {
     "Package": "OpenMx",
-    "Version": "2.22.9",
+    "Version": "2.22.10",
     "SystemRequirements": "GNU make, C++17"
   },
   {
@@ -4066,12 +4086,12 @@
   },
   {
     "Package": "openssl",
-    "Version": "2.3.3",
+    "Version": "2.3.4",
     "SystemRequirements": "OpenSSL >= 1.0.2"
   },
   {
     "Package": "OpenStreetMap",
-    "Version": "0.4.0",
+    "Version": "0.4.1",
     "SystemRequirements": "Java (>= 1.8), JRI"
   },
   {
@@ -4094,11 +4114,6 @@
     "Version": "1.0.0",
     "SystemRequirements": "Tesseract >= 5.0.0, libtesseract-dev (deb), tesseract-devel (rpm), libleptonica-dev (deb), leptonica-devel (rpm), tesseract-ocr-eng (deb), libpoppler-cpp-dev (deb), poppler-cpp-devel (rpm), poppler-data (rpm/deb), libxml2-dev (deb), libxml2-devel (rpm)"
   },
-  {
-    "Package": "orderly",
-    "Version": "1.4.3",
-    "SystemRequirements": "git"
-  },
   {
     "Package": "ordinalbayes",
     "Version": "0.1.2",
@@ -4121,7 +4136,7 @@
   },
   {
     "Package": "otelsdk",
-    "Version": "0.2.1",
+    "Version": "0.2.2",
     "SystemRequirements": "cmake, protobuf-compiler, libprotobuf, libcurl, zlib, GNU make"
   },
   {
@@ -4156,14 +4171,9 @@
   },
   {
     "Package": "papaja",
-    "Version": "0.1.3",
+    "Version": "0.1.4",
     "SystemRequirements": "Rendering the document template requires pandoc (>= 2.0; https://pandoc.org) and for PDFs a TeX distribution, such as TinyTeX (>= 0.12; https://yihui.org/tinytex/)"
   },
-  {
-    "Package": "parallelDist",
-    "Version": "0.2.6",
-    "SystemRequirements": "C++11"
-  },
   {
     "Package": "paramlink",
     "Version": "1.1-6",
@@ -4206,7 +4216,7 @@
   },
   {
     "Package": "pathling",
-    "Version": "8.1.0",
+    "Version": "9.0.0",
     "SystemRequirements": "Spark: 3.5.x"
   },
   {
@@ -4216,12 +4226,12 @@
   },
   {
     "Package": "patternplot",
-    "Version": "1.0.0",
+    "Version": "2.0.0",
     "SystemRequirements": "GNU make"
   },
   {
     "Package": "paws.common",
-    "Version": "0.8.5",
+    "Version": "0.8.7",
     "SystemRequirements": "pandoc (>= 1.12.3) - http://pandoc.org"
   },
   {
@@ -4241,7 +4251,7 @@
   },
   {
     "Package": "PBSmodelling",
-    "Version": "2.69.3",
+    "Version": "2.70.2",
     "SystemRequirements": "BWidget"
   },
   {
@@ -4279,11 +4289,6 @@
     "Version": "3.6.0",
     "SystemRequirements": "Poppler C++ API: libpoppler-cpp-dev (deb) or poppler-cpp-devel (rpm), and poppler-data (rpm/deb) package."
   },
-  {
-    "Package": "pdSpecEst",
-    "Version": "1.2.4",
-    "SystemRequirements": "GNU make, C++11"
-  },
   {
     "Package": "pedometrics",
     "Version": "0.12.1",
@@ -4294,6 +4299,11 @@
     "Version": "1.0.1",
     "SystemRequirements": "MERLIN (https://csg.sph.umich.edu/abecasis/merlin/) for calculations involving multiple linked markers."
   },
+  {
+    "Package": "pema",
+    "Version": "0.1.5",
+    "SystemRequirements": "GNU make"
+  },
   {
     "Package": "PenCoxFrail",
     "Version": "2.0.0",
@@ -4306,12 +4316,12 @@
   },
   {
     "Package": "PEPBVS",
-    "Version": "2.1",
+    "Version": "2.2",
     "SystemRequirements": "GNU GSL"
   },
   {
     "Package": "persistence",
-    "Version": "0.1.0",
+    "Version": "0.2.0",
     "SystemRequirements": "C++20"
   },
   {
@@ -4339,11 +4349,6 @@
     "Version": "0.1.1",
     "SystemRequirements": "GNU make"
   },
-  {
-    "Package": "piton",
-    "Version": "1.0.0",
-    "SystemRequirements": "C++11"
-  },
   {
     "Package": "pivmet",
     "Version": "0.6.0",
@@ -4351,7 +4356,7 @@
   },
   {
     "Package": "pkgdown",
-    "Version": "2.1.3",
+    "Version": "2.2.0",
     "SystemRequirements": "pandoc"
   },
   {
@@ -4376,7 +4381,7 @@
   },
   {
     "Package": "plinkQC",
-    "Version": "0.3.4",
+    "Version": "1.0.0",
     "SystemRequirements": "plink (1.9)"
   },
   {
@@ -4421,7 +4426,7 @@
   },
   {
     "Package": "pomp",
-    "Version": "6.3",
+    "Version": "6.4",
     "SystemRequirements": "For Windows users, Rtools (see https://cran.r-project.org/bin/windows/Rtools/)."
   },
   {
@@ -4434,6 +4439,11 @@
     "Version": "1.2.0",
     "SystemRequirements": "JAGS (>= 4.1)"
   },
+  {
+    "Package": "poseticDataAnalysis",
+    "Version": "0.1.1",
+    "SystemRequirements": "C++20"
+  },
   {
     "Package": "POSetR",
     "Version": "1.1.4",
@@ -4531,7 +4541,7 @@
   },
   {
     "Package": "prome",
-    "Version": "1.9.1.0",
+    "Version": "3.0.1.5",
     "SystemRequirements": "GNU make"
   },
   {
@@ -4564,11 +4574,21 @@
     "Version": "1.1.0",
     "SystemRequirements": "GNU make"
   },
+  {
+    "Package": "psbcSpeedUp",
+    "Version": "2.1.0",
+    "SystemRequirements": "C++17"
+  },
   {
     "Package": "psborrow2",
     "Version": "0.0.4.0",
     "SystemRequirements": "cmdstan"
   },
+  {
+    "Package": "PSPI",
+    "Version": "1.2",
+    "SystemRequirements": "GNU make"
+  },
   {
     "Package": "PTXQC",
     "Version": "1.1.3",
@@ -4631,7 +4651,7 @@
   },
   {
     "Package": "qs2",
-    "Version": "0.1.5",
+    "Version": "0.1.6",
     "SystemRequirements": "GNU make"
   },
   {
@@ -4646,7 +4666,7 @@
   },
   {
     "Package": "qualpalr",
-    "Version": "1.0.0",
+    "Version": "1.0.1",
     "SystemRequirements": "C++17"
   },
   {
@@ -4656,7 +4676,7 @@
   },
   {
     "Package": "QuantRegGLasso",
-    "Version": "1.0.0",
+    "Version": "1.0.1",
     "SystemRequirements": "GNU make"
   },
   {
@@ -4701,7 +4721,7 @@
   },
   {
     "Package": "R2MLwiN",
-    "Version": "0.8-9",
+    "Version": "0.8-10",
     "SystemRequirements": "MLwiN, (OpenBUGS, WinBUGS optional)"
   },
   {
@@ -4746,7 +4766,7 @@
   },
   {
     "Package": "rapidjsonr",
-    "Version": "1.2.0",
+    "Version": "1.2.1",
     "SystemRequirements": "GNU make"
   },
   {
@@ -4779,6 +4799,11 @@
     "Version": "1.3.2",
     "SystemRequirements": "GNU make"
   },
+  {
+    "Package": "RAthena",
+    "Version": "2.6.3",
+    "SystemRequirements": "Python and boto3 >= 1.14.0 (https://aws.amazon.com/sdk-for-python)"
+  },
   {
     "Package": "RationalMatrix",
     "Version": "1.0.0",
@@ -4816,7 +4841,7 @@
   },
   {
     "Package": "rbedrock",
-    "Version": "0.4.1",
+    "Version": "0.4.2",
     "SystemRequirements": "cmake, zlib, GNU make"
   },
   {
@@ -4831,9 +4856,14 @@
   },
   {
     "Package": "rbi.helpers",
-    "Version": "0.4.0",
+    "Version": "0.4.1",
     "SystemRequirements": "libbi (>= 1.4.2)"
   },
+  {
+    "Package": "rbioacc",
+    "Version": "1.3.1",
+    "SystemRequirements": "GNU make"
+  },
   {
     "Package": "Rblpapi",
     "Version": "0.3.16",
@@ -4871,12 +4901,12 @@
   },
   {
     "Package": "rcdk",
-    "Version": "3.8.1",
+    "Version": "3.8.2",
     "SystemRequirements": "Java (>= 8)"
   },
   {
     "Package": "rcdo",
-    "Version": "0.3.0",
+    "Version": "0.3.2",
     "SystemRequirements": "cdo"
   },
   {
@@ -4921,7 +4951,7 @@
   },
   {
     "Package": "RcppCWB",
-    "Version": "0.6.8",
+    "Version": "0.6.10",
     "SystemRequirements": "GNU make, pcre2 (>= 10.00), GLib (>= 2.0.0). On Windows, no prior installations are necessary, as pre-built (i.e. cross-compiled) binaries of required libraries are downloaded from a GitHub repository (<https://github.com/PolMine/libcl>) during installation. On macOS, static libraries of Glib are downloaded (<https://github.com/PolMine/libglib>) if Glib is not present."
   },
   {
@@ -5019,9 +5049,14 @@
     "Version": "0.1.5",
     "SystemRequirements": "libjpeg, libpng"
   },
+  {
+    "Package": "readepi",
+    "Version": "1.0.3",
+    "SystemRequirements": "odbc, libmariadbclient-dev"
+  },
   {
     "Package": "readNSx",
-    "Version": "0.0.5",
+    "Version": "0.0.6",
     "SystemRequirements": "HDF5 (>= 1.8.13), little-endian platform"
   },
   {
@@ -5031,7 +5066,7 @@
   },
   {
     "Package": "redatamx",
-    "Version": "1.1.4",
+    "Version": "1.2.1",
     "SystemRequirements": "'Redatam' runtime engine (see https://redatam.org), The dynamic binary library is downloaded from <https://redatam-core.s3.us-west-2.amazonaws.com> during the build step. Currently supported platforms are Windows, Linux and macOS."
   },
   {
@@ -5041,7 +5076,7 @@
   },
   {
     "Package": "redist",
-    "Version": "4.3.0",
+    "Version": "4.3.1",
     "SystemRequirements": "C++17, python"
   },
   {
@@ -5059,11 +5094,6 @@
     "Version": "1.1.5",
     "SystemRequirements": "hiredis"
   },
-  {
-    "Package": "registr",
-    "Version": "2.1.0",
-    "SystemRequirements": "GNU make"
-  },
   {
     "Package": "relMix",
     "Version": "1.4.1",
@@ -5076,7 +5106,7 @@
   },
   {
     "Package": "REMixed",
-    "Version": "0.1.0",
+    "Version": "1.1.1",
     "SystemRequirements": "'Monolix' (<https://monolixsuite.slp-software.com/>)"
   },
   {
@@ -5119,6 +5149,11 @@
     "Version": "0.7.0",
     "SystemRequirements": "PROJ (>= 4.4.6)"
   },
+  {
+    "Package": "repsim",
+    "Version": "0.1.0",
+    "SystemRequirements": "C++17"
+  },
   {
     "Package": "reservoirnet",
     "Version": "0.3.0",
@@ -5141,7 +5176,7 @@
   },
   {
     "Package": "reticulate",
-    "Version": "1.43.0",
+    "Version": "1.44.1",
     "SystemRequirements": "Python (>= 2.7.0)"
   },
   {
@@ -5166,12 +5201,12 @@
   },
   {
     "Package": "Rfast",
-    "Version": "2.1.5.1",
+    "Version": "2.1.5.2",
     "SystemRequirements": "C++17"
   },
   {
     "Package": "Rfast2",
-    "Version": "0.1.5.4",
+    "Version": "0.1.5.5",
     "SystemRequirements": "C++17"
   },
   {
@@ -5181,9 +5216,14 @@
   },
   {
     "Package": "rfriend",
-    "Version": "1.0.0",
+    "Version": "2.0.0",
     "SystemRequirements": "Pandoc (>= 3.2)"
   },
+  {
+    "Package": "Rfuzzycoco",
+    "Version": "0.1.0",
+    "SystemRequirements": "C++17"
+  },
   {
     "Package": "rgeedim",
     "Version": "0.2.7",
@@ -5201,8 +5241,8 @@
   },
   {
     "Package": "rgl",
-    "Version": "1.3.24",
-    "SystemRequirements": "OpenGL and GLU Library (Required for display in R. See \"Installing OpenGL support\" in README.md. Not needed if only browser displays using rglwidget() are wanted.), zlib (optional), libpng (>=1.2.9, optional), FreeType (optional), pandoc (>=1.14, needed for vignettes)"
+    "Version": "1.3.31",
+    "SystemRequirements": "OpenGL and GLU Library (Required for display in R. See \"Installing OpenGL support\" in README.md. Not needed if only browser displays using rglwidget() are wanted.), zlib (optional), libpng (>=1.2.9, optional), FreeType (optional), pandoc (>=1.14, needed for vignettes), LaTeX needed for optional latex3d() examples."
   },
   {
     "Package": "Rglpk",
@@ -5244,6 +5284,11 @@
     "Version": "0.2.0",
     "SystemRequirements": "iRODS C++ HTTP API 0.2.0 (<https://github.com/irods/irods_client_http_api>)"
   },
+  {
+    "Package": "rixpress",
+    "Version": "0.10.1",
+    "SystemRequirements": "Nix"
+  },
   {
     "Package": "rjags",
     "Version": "4-17",
@@ -5266,12 +5311,12 @@
   },
   {
     "Package": "rjdqa",
-    "Version": "0.1.5",
+    "Version": "0.1.6",
     "SystemRequirements": "Java (>= 8)"
   },
   {
     "Package": "RJSDMX",
-    "Version": "3.7-0",
+    "Version": "3.8-0",
     "SystemRequirements": "Java (>= 8)"
   },
   {
@@ -5309,11 +5354,6 @@
     "Version": "1.4.4",
     "SystemRequirements": "GNU GSL"
   },
-  {
-    "Package": "RLRsim",
-    "Version": "3.1-8",
-    "SystemRequirements": "C++11"
-  },
   {
     "Package": "RMariaDB",
     "Version": "1.3.4",
@@ -5326,7 +5366,7 @@
   },
   {
     "Package": "rmarkdown",
-    "Version": "2.29",
+    "Version": "2.30",
     "SystemRequirements": "pandoc (>= 1.14) - http://pandoc.org"
   },
   {
@@ -5386,7 +5426,7 @@
   },
   {
     "Package": "Rmpfr",
-    "Version": "1.1-1",
+    "Version": "1.1-2",
     "SystemRequirements": "gmp (>= 4.2.3), mpfr (>= 3.2.0), pdfcrop (part of TexLive) is required to rebuild the vignettes."
   },
   {
@@ -5446,7 +5486,7 @@
   },
   {
     "Package": "rodeo",
-    "Version": "0.8.2",
+    "Version": "0.9.2",
     "SystemRequirements": "The tools to run 'R CMD SHLIB' on 'Fortran' code. The used 'Fortran' compiler must support pointer initialization which is a feature of the 2008 standard."
   },
   {
@@ -5474,6 +5514,11 @@
     "Version": "0.9.23",
     "SystemRequirements": "GNU Make, swi-prolog"
   },
+  {
+    "Package": "Romeb",
+    "Version": "0.1.2",
+    "SystemRequirements": "JAGS"
+  },
   {
     "Package": "ropenblas",
     "Version": "0.4.0",
@@ -5484,15 +5529,10 @@
     "Version": "4.110.0",
     "SystemRequirements": "cmake"
   },
-  {
-    "Package": "roptim",
-    "Version": "0.1.6",
-    "SystemRequirements": "C++11"
-  },
   {
     "Package": "ROracle",
-    "Version": "1.3-1.1",
-    "SystemRequirements": "Oracle Instant Client or Oracle Database Client"
+    "Version": "1.5-1",
+    "SystemRequirements": "curl Oracle Instant Client or Oracle Database Client"
   },
   {
     "Package": "Rpadrino",
@@ -5504,6 +5544,11 @@
     "Version": "0.2.5",
     "SystemRequirements": "GNU make"
   },
+  {
+    "Package": "RPesto",
+    "Version": "0.1.4",
+    "SystemRequirements": "Cargo (Rust's package manager), rustc"
+  },
   {
     "Package": "rpf",
     "Version": "1.0.15",
@@ -5536,7 +5581,7 @@
   },
   {
     "Package": "RPushbullet",
-    "Version": "0.3.4",
+    "Version": "0.3.5",
     "SystemRequirements": "A user API key (which one can request from the website at <http://www.pushbullet.com>), and one or more devices to push messages to which may be any one of an (Android or iOS) phone, a (Chrome or Firefox, or Opera or Safari) browser or the (Windows or Mac) desktop application provided the corresponding Pushbullet 'app' has been installed on any one of these."
   },
   {
@@ -5626,7 +5671,7 @@
   },
   {
     "Package": "rstanarm",
-    "Version": "2.32.1",
+    "Version": "2.32.2",
     "SystemRequirements": "GNU make, pandoc (>= 1.12.3), pandoc-citeproc"
   },
   {
@@ -5666,7 +5711,7 @@
   },
   {
     "Package": "rsyncrosim",
-    "Version": "2.1.2",
+    "Version": "2.1.9",
     "SystemRequirements": "SyncroSim (>=3.1.0)"
   },
   {
@@ -5686,8 +5731,8 @@
   },
   {
     "Package": "rtika",
-    "Version": "2.7.0",
-    "SystemRequirements": "Java (>=8)"
+    "Version": "3.2.3",
+    "SystemRequirements": "Java (>=11)"
   },
   {
     "Package": "rtiktoken",
@@ -5736,7 +5781,7 @@
   },
   {
     "Package": "rvg",
-    "Version": "0.3.5",
+    "Version": "0.4.0",
     "SystemRequirements": "libpng"
   },
   {
@@ -5794,6 +5839,11 @@
     "Version": "1.1.9",
     "SystemRequirements": "cmake, OpenSSL >= 1.0.1, Abseil >= 20230802.0"
   },
+  {
+    "Package": "s2dv",
+    "Version": "2.2.1",
+    "SystemRequirements": "cdo"
+  },
   {
     "Package": "sacRebleu",
     "Version": "0.2.0",
@@ -5801,7 +5851,7 @@
   },
   {
     "Package": "saeHB",
-    "Version": "0.2.2",
+    "Version": "0.2.3",
     "SystemRequirements": "JAGS (http://mcmc-jags.sourceforge.net)"
   },
   {
@@ -5851,7 +5901,7 @@
   },
   {
     "Package": "saros.base",
-    "Version": "1.1.0",
+    "Version": "1.2.0",
     "SystemRequirements": "None."
   },
   {
@@ -5859,11 +5909,6 @@
     "Version": "0.6.16",
     "SystemRequirements": "mallinfo, hence Linux, MacOS or Windows"
   },
-  {
-    "Package": "sasfunclust",
-    "Version": "1.0.0",
-    "SystemRequirements": "GNU make"
-  },
   {
     "Package": "SASmarkdown",
     "Version": "0.8.7",
@@ -5874,11 +5919,6 @@
     "Version": "0.4.10",
     "SystemRequirements": "GNU make"
   },
-  {
-    "Package": "sbo",
-    "Version": "0.5.0",
-    "SystemRequirements": "C++11"
-  },
   {
     "Package": "sbrl",
     "Version": "1.4",
@@ -5889,11 +5929,6 @@
     "Version": "1.0",
     "SystemRequirements": "GNU make"
   },
-  {
-    "Package": "scanstatistics",
-    "Version": "1.1.1",
-    "SystemRequirements": "C++11"
-  },
   {
     "Package": "scistreer",
     "Version": "1.2.0",
@@ -5921,7 +5956,7 @@
   },
   {
     "Package": "sdmTMB",
-    "Version": "0.7.4",
+    "Version": "0.8.0",
     "SystemRequirements": "GNU make"
   },
   {
@@ -5931,7 +5966,12 @@
   },
   {
     "Package": "secr",
-    "Version": "5.2.4",
+    "Version": "5.3.0",
+    "SystemRequirements": "GNU make"
+  },
+  {
+    "Package": "secrfunc",
+    "Version": "1.0.0",
     "SystemRequirements": "GNU make"
   },
   {
@@ -5949,6 +5989,11 @@
     "Version": "1.1.0",
     "SystemRequirements": "C++17"
   },
+  {
+    "Package": "SelectBoost.gamlss",
+    "Version": "0.2.2",
+    "SystemRequirements": "C++17"
+  },
   {
     "Package": "semver",
     "Version": "0.2.0",
@@ -5976,7 +6021,7 @@
   },
   {
     "Package": "seqHMM",
-    "Version": "2.0.0",
+    "Version": "2.1.0",
     "SystemRequirements": "GNU make"
   },
   {
@@ -5991,12 +6036,12 @@
   },
   {
     "Package": "seqtrie",
-    "Version": "0.2.9",
+    "Version": "0.3.5",
     "SystemRequirements": "GNU make"
   },
   {
     "Package": "sequoia",
-    "Version": "3.0.3",
+    "Version": "3.1.3",
     "SystemRequirements": "Fortran95"
   },
   {
@@ -6011,7 +6056,7 @@
   },
   {
     "Package": "sf",
-    "Version": "1.0-21",
+    "Version": "1.0-23",
     "SystemRequirements": "GDAL (>= 2.0.1), GEOS (>= 3.4.0), PROJ (>= 4.8.0), sqlite3"
   },
   {
@@ -6076,7 +6121,7 @@
   },
   {
     "Package": "shrinkGPR",
-    "Version": "1.1",
+    "Version": "1.1.1",
     "SystemRequirements": "torch backend, for installation guide see https://cran.r-project.org/web/packages/torch/vignettes/installation.html"
   },
   {
@@ -6096,7 +6141,7 @@
   },
   {
     "Package": "SimInf",
-    "Version": "9.8.1",
+    "Version": "10.1.0",
     "SystemRequirements": "GNU Scientific Library (GSL)"
   },
   {
@@ -6124,6 +6169,11 @@
     "Version": "0.0.4",
     "SystemRequirements": "JAGS 4.x.y"
   },
+  {
+    "Package": "simStateSpace",
+    "Version": "1.2.12",
+    "SystemRequirements": "GNU GSL (>= 2.5)"
+  },
   {
     "Package": "SimSurvNMarker",
     "Version": "0.1.3",
@@ -6134,11 +6184,6 @@
     "Version": "0.0.4",
     "SystemRequirements": "Quarto command line tools (https://github.com/quarto-dev/quarto-cli)."
   },
-  {
-    "Package": "skm",
-    "Version": "0.1.5.4",
-    "SystemRequirements": "GNU make"
-  },
   {
     "Package": "slasso",
     "Version": "1.0.0",
@@ -6146,7 +6191,7 @@
   },
   {
     "Package": "slendr",
-    "Version": "1.2.0",
+    "Version": "1.3.0",
     "SystemRequirements": "'SLiM' is a forward simulation software for population genetics and evolutionary biology. See <https://messerlab.org/slim/> for installation instructions and further information. The 'Python' coalescent framework 'msprime' and the 'tskit' module can by installed by following the instructions at <https://tskit.dev/>."
   },
   {
@@ -6161,7 +6206,7 @@
   },
   {
     "Package": "SLOPE",
-    "Version": "1.0.1",
+    "Version": "1.2.0",
     "SystemRequirements": "C++17"
   },
   {
@@ -6196,7 +6241,7 @@
   },
   {
     "Package": "smoothemplik",
-    "Version": "0.0.15",
+    "Version": "0.0.17",
     "SystemRequirements": "GNU make"
   },
   {
@@ -6206,8 +6251,8 @@
   },
   {
     "Package": "socratadata",
-    "Version": "0.1.0",
-    "SystemRequirements": "Cargo (Rust's package manager), rustc >= 1.65.0"
+    "Version": "0.1.1",
+    "SystemRequirements": "Cargo (Rust's package manager), rustc >= 1.65.0, xz"
   },
   {
     "Package": "sodium",
@@ -6251,7 +6296,7 @@
   },
   {
     "Package": "sparklyr",
-    "Version": "1.9.1",
+    "Version": "1.9.3",
     "SystemRequirements": "Spark: 2.x, or 3.x, or 4.x"
   },
   {
@@ -6284,11 +6329,6 @@
     "Version": "0.3.3.7",
     "SystemRequirements": "C++11"
   },
-  {
-    "Package": "SPARSEMODr",
-    "Version": "1.2.0",
-    "SystemRequirements": "GNU GSL (>= 2.7)"
-  },
   {
     "Package": "sparsesurv",
     "Version": "0.1.1",
@@ -6309,19 +6349,14 @@
     "Version": "0.4.1",
     "SystemRequirements": "C++11"
   },
-  {
-    "Package": "spatialwidget",
-    "Version": "0.2.5",
-    "SystemRequirements": "C++14"
-  },
   {
     "Package": "SpatMCA",
-    "Version": "1.0.4",
-    "SystemRequirements": "GNU make"
+    "Version": "1.0.7",
+    "SystemRequirements": "C++17, GNU make"
   },
   {
     "Package": "SpatPCA",
-    "Version": "1.3.5",
+    "Version": "1.3.8",
     "SystemRequirements": "GNU make"
   },
   {
@@ -6341,12 +6376,12 @@
   },
   {
     "Package": "spcosa",
-    "Version": "0.4-4",
+    "Version": "0.4-6",
     "SystemRequirements": "Java (>= 6)"
   },
   {
     "Package": "speakeasyR",
-    "Version": "0.1.7",
+    "Version": "0.1.8",
     "SystemRequirements": "arpack (optional)"
   },
   {
@@ -6354,11 +6389,6 @@
     "Version": "0.0.1.7",
     "SystemRequirements": "fftw3 (>= 3.1.2)"
   },
-  {
-    "Package": "spectre",
-    "Version": "1.0.2",
-    "SystemRequirements": "C++11"
-  },
   {
     "Package": "spherepc",
     "Version": "0.1.7",
@@ -6366,7 +6396,7 @@
   },
   {
     "Package": "spNetwork",
-    "Version": "0.4.4.6",
+    "Version": "0.4.4.7",
     "SystemRequirements": "C++17"
   },
   {
@@ -6391,7 +6421,7 @@
   },
   {
     "Package": "SqlRender",
-    "Version": "1.19.3",
+    "Version": "1.19.4",
     "SystemRequirements": "Java (>= 8)"
   },
   {
@@ -6439,6 +6469,11 @@
     "Version": "3.2.2",
     "SystemRequirements": "Java (>= 8.0)"
   },
+  {
+    "Package": "startR",
+    "Version": "3.0.0",
+    "SystemRequirements": "cdo ecFlow"
+  },
   {
     "Package": "starvz",
     "Version": "0.8.3",
@@ -6446,12 +6481,12 @@
   },
   {
     "Package": "Statamarkdown",
-    "Version": "0.9.4",
+    "Version": "0.9.6",
     "SystemRequirements": "Stata"
   },
   {
     "Package": "statgenGxE",
-    "Version": "1.0.10",
+    "Version": "1.0.11",
     "SystemRequirements": "pdflatex"
   },
   {
@@ -6471,7 +6506,7 @@
   },
   {
     "Package": "stmgp",
-    "Version": "1.0.4.1",
+    "Version": "1.0.4.2",
     "SystemRequirements": "PLINK must be installed"
   },
   {
@@ -6481,7 +6516,7 @@
   },
   {
     "Package": "stochtree",
-    "Version": "0.1.1",
+    "Version": "0.2.0",
     "SystemRequirements": "C++17"
   },
   {
@@ -6586,7 +6621,7 @@
   },
   {
     "Package": "svglite",
-    "Version": "2.2.1",
+    "Version": "2.2.2",
     "SystemRequirements": "libpng"
   },
   {
@@ -6626,7 +6661,7 @@
   },
   {
     "Package": "systemfonts",
-    "Version": "1.2.3",
+    "Version": "1.3.1",
     "SystemRequirements": "fontconfig, freetype2"
   },
   {
@@ -6641,7 +6676,7 @@
   },
   {
     "Package": "tabr",
-    "Version": "0.5.3",
+    "Version": "0.5.4",
     "SystemRequirements": "LilyPond v2.22.1-2+ (needed for rendering sheet music or writing MIDI files)"
   },
   {
@@ -6660,14 +6695,9 @@
     "SystemRequirements": "zlib headers and library"
   },
   {
-    "Package": "tardis",
-    "Version": "0.1.4",
-    "SystemRequirements": "C++11"
-  },
-  {
-    "Package": "TBRDist",
-    "Version": "1.0.2",
-    "SystemRequirements": "C++11"
+    "Package": "tci",
+    "Version": "0.2.1",
+    "SystemRequirements": "C++17"
   },
   {
     "Package": "TCIU",
@@ -6716,12 +6746,12 @@
   },
   {
     "Package": "terminalgraphics",
-    "Version": "0.1.1",
+    "Version": "0.2.1",
     "SystemRequirements": "A terminal emulator supporting the Terminal Graphics Protocol (<https://sw.kovidgoyal.net/kitty/graphics-protocol/>) or Sixel."
   },
   {
     "Package": "terra",
-    "Version": "1.8-60",
+    "Version": "1.8-86",
     "SystemRequirements": "C++17, GDAL (>= 2.2.3), GEOS (>= 3.4.0), PROJ (>= 4.9.3), TBB, sqlite3"
   },
   {
@@ -6756,8 +6786,8 @@
   },
   {
     "Package": "textmineR",
-    "Version": "3.0.5",
-    "SystemRequirements": "GNU make, C++11"
+    "Version": "3.0.6",
+    "SystemRequirements": "GNU make"
   },
   {
     "Package": "textrecipes",
@@ -6766,7 +6796,7 @@
   },
   {
     "Package": "textshaping",
-    "Version": "1.0.3",
+    "Version": "1.0.4",
     "SystemRequirements": "freetype2, harfbuzz, fribidi"
   },
   {
@@ -6861,7 +6891,7 @@
   },
   {
     "Package": "tiledb",
-    "Version": "0.32.0",
+    "Version": "0.33.0",
     "SystemRequirements": "A C++17 compiler is required; on macOS compilation version 11.0 or later is required. Optionally cmake (only when TileDB source build selected), curl (only when TileDB source build selected)), and git (only when TileDB source build selected); on x86_64 and M1 platforms pre-built TileDB Embedded libraries are available at GitHub and are used if no TileDB installation is detected, and no other option to build or download was specified by the user."
   },
   {
@@ -6906,7 +6936,7 @@
   },
   {
     "Package": "tok",
-    "Version": "0.2.0",
+    "Version": "0.2.1",
     "SystemRequirements": "Cargo (Rust's package manager), rustc >= 1.75"
   },
   {
@@ -6931,7 +6961,7 @@
   },
   {
     "Package": "topicmodels.etm",
-    "Version": "0.1.0",
+    "Version": "0.1.1",
     "SystemRequirements": "LibTorch (https://pytorch.org/)"
   },
   {
@@ -6941,14 +6971,9 @@
   },
   {
     "Package": "torch",
-    "Version": "0.16.0",
+    "Version": "0.16.3",
     "SystemRequirements": "LibTorch (https://pytorch.org/); Only x86_64 platforms are currently supported except for ARM system running macOS."
   },
-  {
-    "Package": "touch",
-    "Version": "0.1-6",
-    "SystemRequirements": "C++11"
-  },
   {
     "Package": "trackdem",
     "Version": "0.7.2",
@@ -6966,7 +6991,7 @@
   },
   {
     "Package": "TreeDist",
-    "Version": "2.10.1",
+    "Version": "2.11.1",
     "SystemRequirements": "C++17, pandoc-citeproc"
   },
   {
@@ -6976,7 +7001,7 @@
   },
   {
     "Package": "treestats",
-    "Version": "1.70.7",
+    "Version": "1.70.8",
     "SystemRequirements": "C++17"
   },
   {
@@ -6996,7 +7021,7 @@
   },
   {
     "Package": "TriDimRegression",
-    "Version": "1.0.2",
+    "Version": "1.0.3",
     "SystemRequirements": "GNU make"
   },
   {
@@ -7066,7 +7091,7 @@
   },
   {
     "Package": "ubms",
-    "Version": "1.2.7",
+    "Version": "1.2.8",
     "SystemRequirements": "GNU make"
   },
   {
@@ -7091,7 +7116,7 @@
   },
   {
     "Package": "units",
-    "Version": "0.8-7",
+    "Version": "1.0-0",
     "SystemRequirements": "udunits-2"
   },
   {
@@ -7101,7 +7126,7 @@
   },
   {
     "Package": "unmarked",
-    "Version": "1.5.0",
+    "Version": "1.5.1",
     "SystemRequirements": "GNU make"
   },
   {
@@ -7126,7 +7151,7 @@
   },
   {
     "Package": "V8",
-    "Version": "7.0.0",
+    "Version": "8.0.1",
     "SystemRequirements": "On Linux you can build against libv8-dev (Debian) or v8-devel (Fedora). We also provide static libv8 binaries for most platforms, see the README for details."
   },
   {
@@ -7141,7 +7166,7 @@
   },
   {
     "Package": "vapour",
-    "Version": "0.12.0",
+    "Version": "0.13.0",
     "SystemRequirements": "libgdal-dev, GDAL (>= 2.2.3), PROJ (>= 4.8.0)"
   },
   {
@@ -7161,7 +7186,7 @@
   },
   {
     "Package": "vcfppR",
-    "Version": "0.8.1",
+    "Version": "0.8.2",
     "SystemRequirements": "libcurl: libcurl-devel (rpm) or libcurl4-openssl-dev (deb), GNU make."
   },
   {
@@ -7181,8 +7206,8 @@
   },
   {
     "Package": "VertexWiseR",
-    "Version": "1.4.1",
-    "SystemRequirements": "Miniconda3 (v24.9.2), Python (<= v3.12), BrainStat (v0.4.2), vtk (v9.3.1), numpy (<= v1.26.4)"
+    "Version": "1.4.3",
+    "SystemRequirements": "Miniconda3 (v24.9.2), Python (<= v3.12), BrainStat (v0.4.2), vtk (v9.3.1), numpy (<= v1.26.4), nilearn (<= v0.12.0), netneurotools (<= v0.2.5)"
   },
   {
     "Package": "virtuoso",
@@ -7215,14 +7240,14 @@
     "SystemRequirements": "GNU make"
   },
   {
-    "Package": "watcher",
-    "Version": "0.1.4",
-    "SystemRequirements": "'libfswatch', or 'cmake' to compile from package sources"
+    "Package": "warbleR",
+    "Version": "1.1.37",
+    "SystemRequirements": "fftw3, GNU make, sox, Ghostscript, libsndfile, GDAL"
   },
   {
-    "Package": "wav",
-    "Version": "0.1.0",
-    "SystemRequirements": "C++11"
+    "Package": "watcher",
+    "Version": "0.1.5",
+    "SystemRequirements": "'libfswatch', or 'cmake' to compile from package sources"
   },
   {
     "Package": "webdriver",
@@ -7244,11 +7269,6 @@
     "Version": "1.4.4",
     "SystemRequirements": "GNU make, OpenSSL >= 1.0.2"
   },
-  {
-    "Package": "WeibullR",
-    "Version": "1.2.1",
-    "SystemRequirements": "C++11"
-  },
   {
     "Package": "WeightedTreemaps",
     "Version": "0.1.4",
@@ -7271,7 +7291,7 @@
   },
   {
     "Package": "whitebox",
-    "Version": "2.4.0",
+    "Version": "2.4.3",
     "SystemRequirements": "WhiteboxTools (https://github.com/jblindsay/whitebox-tools/releases/latest)"
   },
   {
@@ -7361,12 +7381,12 @@
   },
   {
     "Package": "XML",
-    "Version": "3.99-0.19",
+    "Version": "3.99-0.20",
     "SystemRequirements": "libxml2 (>= 2.6.3)"
   },
   {
     "Package": "xml2",
-    "Version": "1.4.0",
+    "Version": "1.5.1",
     "SystemRequirements": "libxml2: libxml2-dev (deb), libxml2-devel (rpm)"
   },
   {
@@ -7374,11 +7394,6 @@
     "Version": "0.2.1",
     "SystemRequirements": "'ghostscript' or 'pdftk' for editing pdf bookmarks and/or documentation info entries. 'exiftool' for editing pdf documentation info entries and/or xmp metadata."
   },
-  {
-    "Package": "XRJulia",
-    "Version": "0.9.0.1",
-    "SystemRequirements": "Julia, v 1.0 or later"
-  },
   {
     "Package": "xslt",
     "Version": "1.5.1",
diff --git a/test/test-packages.sh b/test/test-packages.sh
index a536371..a83de92 100755
--- a/test/test-packages.sh
+++ b/test/test-packages.sh
@@ -9,6 +9,7 @@ declare -A os_identifiers=(
     [jammy]='ubuntu'
     [noble]='ubuntu'
     [bookworm]='debian'
+    [trixie]='debian'
     [sid]='debian'
     [centos7]='centos'
     [centos8]='centos'
@@ -33,6 +34,7 @@ declare -A versions=(
     [jammy]='22.04'
     [noble]='24.04'
     [bookworm]='12'
+    [trixie]='13'
     [sid]='unstable'
     [centos7]='7'
     [centos8]='8'