NRPSpredictor2/build.xml at master · roettig/NRPSpredictor2 · GitHub

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<project xmlns:ivy="antlib:org.apache.ivy.ant" name="NRPSpredictor2" default="build" basedir=".">

	<target name="resolve" description="retrieve dependencies with ivy">
		<!-- use type=jar to skip source jars-->
		<ivy:retrieve />
	</target>

	<target name="prepare" depends="clean,resolve">
		<mkdir dir="bin/"/>
		<mkdir dir="build/"/>
		<tstamp/>
	</target>

	<target name="compile" depends="prepare">
		<javac srcdir="src/" destdir="bin/" includeantruntime="false" debug="on" debuglevel="lines,vars,source">
			<classpath>
				<fileset dir="lib">
					<include name="*.jar"/>
				</fileset>
			</classpath>
		</javac>
	</target>

	<target name="build" depends="compile">
		<copy file="src/org/roettig/NRPSpredictor2/hmmer/hmmpfam.macos64" todir="bin/org/roettig/NRPSpredictor2/hmmer"/>
		<copy file="src/org/roettig/NRPSpredictor2/hmmer/hmmpfam" todir="bin/org/roettig/NRPSpredictor2/hmmer"/>
		<copy file="src/org/roettig/NRPSpredictor2/hmmer/hmmpfam.win32" todir="bin/org/roettig/NRPSpredictor2/hmmer"/>
		<copy file="src/org/roettig/NRPSpredictor2/hmmer/cygwin1.dll" todir="bin/org/roettig/NRPSpredictor2/hmmer"/>
		<copy file="src/org/roettig/NRPSpredictor2/resources/aa-activating.aroundLys.hmm" todir="bin/org/roettig/NRPSpredictor2/resources"/>
		<jar jarfile="build/NRPSpredictor2.jar" basedir="bin"/>
	</target>

	<target name="deploy" depends="build">
		<property name="temp.folder" value="${java.io.tmpdir}/NRPSpredictor2/NRPSpredictor2"/>
		<delete dir="${temp.folder}"/>

		<mkdir dir="${temp.folder}"/>
		<copy todir="${temp.folder}/build">
			<fileset dir="build"/>
		</copy>
		<copy todir="${temp.folder}/lib">
			<fileset dir="lib"/>
		</copy>
		<copy todir="${temp.folder}/examples">
			<fileset dir="examples"/>
		</copy>
		<copy todir="${temp.folder}/data">
			<fileset dir="data"/>
		</copy>
		<copy file="runNRPSpredictor2.sh" todir="${temp.folder}"/>
		<fixcrlf srcdir="${temp.folder}" includes="**/*.sh"
		         eol="lf" eof="remove" />
		<copy file="runNRPSpredictor2.bat" todir="${temp.folder}"/>
		<copy file="README" todir="${temp.folder}"/>
		<zip destfile="build/NRPSpredictor2_${DSTAMP}.zip" basedir="${java.io.tmpdir}/NRPSpredictor2"/>
		<delete dir="${temp.folder}"/>
	</target>

	<target name="clean">
		<delete dir="build"/>
		<delete dir="bin"/>
	</target>
</project>