bugfix in prefilter when only one part is used

sebastiandeorowicz · sebastiandeorowicz · commit 1c4ae8d00689 · 2024-07-11T21:23:57.000+02:00
diff --git a/vclust.py b/vclust.py
@@ -793,7 +793,7 @@ def cmd_kmerdb_all2all(
 
     cmd = [
         f"{bin_path}", 
-        'all2all-parts' if len(db_paths) > 1 else 'all2all',
+        'all2all-parts' if len(db_paths) > 1 else 'all2all-sp',
         '-sparse',
         '-above', f'{kmer_count}', 
         "-t", f"{num_threads}",
