diff --git a/frontend/package.json b/frontend/package.json
index a9de48068..92b027677 100644
--- a/frontend/package.json
+++ b/frontend/package.json
@@ -1,6 +1,6 @@
 {
   "name": "ofrak-app",
-  "version": "3.1.0",
+  "version": "3.2.0",
   "description": "The graphical front-end for OFRAK.",
   "homepage": "https://ofrak.com",
   "private": true,
diff --git a/frontend/src/App.svelte b/frontend/src/App.svelte
index c5ba22244..e925b26a1 100644
--- a/frontend/src/App.svelte
+++ b/frontend/src/App.svelte
@@ -275,5 +275,7 @@ Answer by running riddle.answer('your answer here') from the console.`);
 {/if}
 
 <div class="bottomright">
-  <p><a href="https://ofrak.com" target="_blank" rel="noreferrer">v3.1.0</a></p>
+  <p>
+    <a href="https://ofrak.com" target="_blank" rel="noreferrer">v3.2.0</a>
+  </p>
 </div>
diff --git a/frontend/src/ProjectManager/ProjectManagerBinaryOptions.svelte b/frontend/src/ProjectManager/ProjectManagerBinaryOptions.svelte
index e75ebaacf..bf40fa739 100644
--- a/frontend/src/ProjectManager/ProjectManagerBinaryOptions.svelte
+++ b/frontend/src/ProjectManager/ProjectManagerBinaryOptions.svelte
@@ -32,7 +32,7 @@
   import { selectedProject, settings, selected } from "../stores";
   import Icon from "../Icon.svelte";
 
-  export let name;
+  export let args, selectedBinaryName, forceRefreshProject;
 
   async function deleteBinary() {
     await fetch(`${$settings.backendUrl}/delete_binary_from_project`, {
@@ -42,12 +42,14 @@
       },
       body: JSON.stringify({
         id: $selectedProject.session_id,
-        binary: name,
+        binary: args.name,
       }),
     }).then(async (r) => {
       if (!r.ok) {
         throw Error(JSON.stringify(await r.json(), undefined, 2));
       }
+      selectedBinaryName = undefined;
+      forceRefreshProject = {};
       $selectedProject = await fetch(
         `${$settings.backendUrl}/get_project_by_id?id=${$selectedProject.session_id}`
       ).then((r) => {
@@ -63,6 +65,6 @@
 
 <div>
   <button on:click|stopPropagation="{deleteBinary}"
-    ><Icon url="/icons/trash.svg" />Delete {name} from project.</button
+    ><Icon url="/icons/trash.svg" />Delete {args.name} from project.</button
   >
 </div>
diff --git a/frontend/src/ProjectManager/ProjectManagerOptions.svelte b/frontend/src/ProjectManager/ProjectManagerOptions.svelte
index e503844fd..764b59e42 100644
--- a/frontend/src/ProjectManager/ProjectManagerOptions.svelte
+++ b/frontend/src/ProjectManager/ProjectManagerOptions.svelte
@@ -12,15 +12,18 @@
 </style>
 
 <script>
-  export let focus;
+  export let focus, selectedBinaryName, forceRefreshProject;
 </script>
 
 <div class="hbox">
   <div class="options">
-    {#if focus && typeof focus == "string"}
-      "{focus}"
-    {:else if focus && typeof focus == "object"}
-      <svelte:component this="{focus['object']}" {...focus["args"]} />
+    {#if focus}
+      <svelte:component
+        this="{focus.object}"
+        bind:selectedBinaryName="{selectedBinaryName}"
+        bind:forceRefreshProject="{forceRefreshProject}"
+        bind:args="{focus.args}"
+      />
     {:else}
       Click anywhere to see its options.
     {/if}
diff --git a/frontend/src/ProjectManager/ProjectManagerScriptOptions.svelte b/frontend/src/ProjectManager/ProjectManagerScriptOptions.svelte
index e616ada8d..f8d65d793 100644
--- a/frontend/src/ProjectManager/ProjectManagerScriptOptions.svelte
+++ b/frontend/src/ProjectManager/ProjectManagerScriptOptions.svelte
@@ -31,7 +31,7 @@
   import { selectedProject, settings, selected } from "../stores";
   import Icon from "../Icon.svelte";
 
-  export let name;
+  export let args;
 
   async function deleteScript() {
     await fetch(`${$settings.backendUrl}/delete_script_from_project`, {
@@ -41,7 +41,7 @@
       },
       body: JSON.stringify({
         id: $selectedProject.session_id,
-        script: name,
+        script: args.name,
       }),
     }).then(async (r) => {
       if (!r.ok) {
@@ -55,7 +55,6 @@
         }
         return r.json();
       });
-      console.log($selectedProject);
       return await r.json();
     });
   }
@@ -63,6 +62,6 @@
 
 <div>
   <button on:click|stopPropagation="{deleteScript}"
-    ><Icon url="/icons/trash.svg" />Delete {name} from project.</button
+    ><Icon url="/icons/trash.svg" />Delete {args.name} from project.</button
   >
 </div>
diff --git a/frontend/src/ProjectManager/ProjectManagerToolbar.svelte b/frontend/src/ProjectManager/ProjectManagerToolbar.svelte
index 28700ba9b..d8c2eccd4 100644
--- a/frontend/src/ProjectManager/ProjectManagerToolbar.svelte
+++ b/frontend/src/ProjectManager/ProjectManagerToolbar.svelte
@@ -65,9 +65,9 @@
           }
           $selectedProject = await fetch(
             `${$settings.backendUrl}/get_project_by_id?id=${$selectedProject.session_id}`
-          ).then((r) => {
+          ).then(async (r) => {
             if (!r.ok) {
-              throw Error(r.statusText);
+              throw Error(JSON.stringify(await r.json(), undefined, 2));
             }
             return r.json();
           });
diff --git a/frontend/src/ProjectManager/ProjectManagerView.svelte b/frontend/src/ProjectManager/ProjectManagerView.svelte
index f2ea11c31..02fe6c04a 100644
--- a/frontend/src/ProjectManager/ProjectManagerView.svelte
+++ b/frontend/src/ProjectManager/ProjectManagerView.svelte
@@ -75,11 +75,6 @@
     scriptCheckboxHoverInfo = {};
 
   let binariesForProject = [];
-  for (let binaryName in $selectedProject.binaries) {
-    if ($selectedProject.binaries.hasOwnProperty(binaryName)) {
-      binariesForProject.push(binaryName);
-    }
-  }
 
   export let resources,
     rootResourceLoadPromise,
@@ -88,6 +83,9 @@
     showProjectManager;
 
   async function openProject() {
+    if (!selectedBinaryName) {
+      throw Error("Select a binary to launch!");
+    }
     let rootModel = await fetch(`${$settings.backendUrl}/open_project`, {
       method: "POST",
       headers: {
@@ -98,7 +96,12 @@
         binary: selectedBinaryName,
         script: $selectedProject.binaries[selectedBinaryName].init_script,
       }),
-    }).then((r) => r.json());
+    }).then(async (r) => {
+      if (!r.ok) {
+        throw Error(JSON.stringify(await r.json(), undefined, 2));
+      }
+      return await r.json();
+    });
     rootResource = remote_model_to_resource(rootModel, resources);
     $selected = rootModel.id;
     showProjectManager = false;
@@ -131,6 +134,14 @@
     };
     focusScript = undefined;
   }
+  $: {
+    binariesForProject = [];
+    for (let binaryName in $selectedProject.binaries) {
+      if ($selectedProject.binaries.hasOwnProperty(binaryName)) {
+        binariesForProject.push(binaryName);
+      }
+    }
+  }
 </script>
 
 <div class="title">OFRAK Project Manager</div>
@@ -149,20 +160,25 @@
             <ProjectManagerFocusableLabel
               bind:focus="{focus}"
               label="Binaries"
-              newFocus="{ProjectManagerAddBinaryToProject}"
+              newFocus="{{
+                object: ProjectManagerAddBinaryToProject,
+                args: {},
+              }}"
             />
           </div>
           <div class="hbox2">
             <div class="content">
-              {#each binariesForProject as binaryName}
-                <div class="element">
-                  <ProjectManagerCheckbox
-                    ownValue="{binaryName}"
-                    checkbox="{false}"
-                    bind:focus="{focusBinary}"
-                  />
-                </div>
-              {/each}
+              {#key forceRefreshProject}
+                {#each binariesForProject as binaryName}
+                  <div class="element">
+                    <ProjectManagerCheckbox
+                      ownValue="{binaryName}"
+                      checkbox="{false}"
+                      bind:focus="{focusBinary}"
+                    />
+                  </div>
+                {/each}
+              {/key}
             </div>
           </div>
         </Pane>
@@ -171,7 +187,10 @@
             <ProjectManagerFocusableLabel
               bind:focus="{focus}"
               label="Scripts"
-              newFocus="{ProjectManagerAddScriptToProject}"
+              newFocus="{{
+                object: ProjectManagerAddScriptToProject,
+                args: {},
+              }}"
             />
           </div>
           <div class="hbox2">
@@ -191,10 +210,10 @@
                   </p>
                 {/if}
               </div>
-              {#each $selectedProject.scripts as script}
-                <div class="element">
-                  {#if selectedBinaryName}
-                    {#key forceRefreshProject}
+              {#key forceRefreshProject}
+                {#each $selectedProject.scripts as script}
+                  <div class="element">
+                    {#if selectedBinaryName}
                       <ProjectManagerCheckbox
                         ownValue="{script['name']}"
                         inclusiveSelectionGroup="{$selectedProject.binaries[
@@ -205,21 +224,25 @@
                         bind:focus="{focusScript}"
                         bind:mouseoverInfo="{scriptCheckboxHoverInfo}"
                       />
-                    {/key}
-                  {:else}
-                    <ProjectManagerCheckbox
-                      ownValue="{script['name']}"
-                      bind:focus="{focusScript}"
-                    />
-                  {/if}
-                </div>
-              {/each}
+                    {:else}
+                      <ProjectManagerCheckbox
+                        ownValue="{script['name']}"
+                        bind:focus="{focusScript}"
+                      />
+                    {/if}
+                  </div>
+                {/each}
+              {/key}
             </div>
           </div>
         </Pane>
       </Split>
       <Pane slot="second" paddingVertical="{'1em'}">
-        <ProjectManagerOptions focus="{focus}" />
+        <ProjectManagerOptions
+          focus="{focus}"
+          bind:selectedBinaryName="{selectedBinaryName}"
+          bind:forceRefreshProject="{forceRefreshProject}"
+        />
       </Pane>
     </Split>
   </div>
diff --git a/ofrak_core/CHANGELOG.md b/ofrak_core/CHANGELOG.md
index 4b9b57ee9..005ad3e3b 100644
--- a/ofrak_core/CHANGELOG.md
+++ b/ofrak_core/CHANGELOG.md
@@ -4,17 +4,21 @@ All notable changes to `ofrak` will be documented in this file.
 The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/) and adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
 ## [Unreleased](https://github.com/redballoonsecurity/ofrak/tree/master)
+
+## [3.2.0](https://github.com/redballoonsecurity/ofrak/compare/ofrak-v3.1.0...ofrak-v3.2.0)
 ### Added
 - Add a JFFS2 packer and unpacker. ([#326](https://github.com/redballoonsecurity/ofrak/pull/326))
 - Add method to Resource and data service to search for patterns in its data ([#333](https://github.com/redballoonsecurity/ofrak/pull/333))
 - Add search bars to GUI in order to search for a string or bytes within a resource. ([#345](https://github.com/redballoonsecurity/ofrak/pull/345))
 - Add Identifier, Unpacker, Packer for Intel Hex format. ([#349](https://github.com/redballoonsecurity/ofrak/pull/349))
+- Add unpackers for EXT filesystems (versions 2 through 4). ([#337](https://github.com/redballoonsecurity/ofrak/pull/337))
 - A new feature that allows users to create an OFRAK "project" that contains a collection of scripts and binaries. ([#360](https://github.com/redballoonsecurity/ofrak/pull/360))
 
 ### Changed
 - Support uploading files in chunks to handle files larger than 2GB from the GUI ([#324](https://github.com/redballoonsecurity/ofrak/pull/324))
 
 ### Fixed
+- Save resources affected by data patches and dependency updates on a resource being saved ([#355](https://github.com/redballoonsecurity/ofrak/pull/355))
 
 ## [3.1.0](https://github.com/redballoonsecurity/ofrak/compare/ofrak-v3.0.0...ofrak-v3.1.0)
 ### Added
diff --git a/ofrak_core/ofrak/project/project.py b/ofrak_core/ofrak/project/project.py
index b6ac43da4..b41f10bc1 100644
--- a/ofrak_core/ofrak/project/project.py
+++ b/ofrak_core/ofrak/project/project.py
@@ -48,6 +48,14 @@ def metadata_path(self):
     def readme_path(self):
         return os.path.join(self.path, "README.md")
 
+    @property
+    def trashed_binaries(self):
+        return os.path.join(self.path, ".Trash", "binaries")
+
+    @property
+    def trashed_scripts(self):
+        return os.path.join(self.path, ".Trash", "binaries")
+
     @staticmethod
     def create(name: str, path: str) -> "OfrakProject":
         new_project = OfrakProject(
@@ -130,6 +138,7 @@ def init_from_path(path: str) -> "OfrakProject":
             scripts,
         )
 
+        project._restore_trashed_files()
         return project
 
     def script_path(self, script_name, check: bool = True) -> str:
@@ -231,26 +240,27 @@ def add_script(self, name: str, script_contents: str):
             f.write(script_contents)
 
     def delete_binary(self, name: str):
-        if not os.path.isdir(os.path.join(self.path, ".Trash")):
-            os.mkdir(os.path.join(self.path, ".Trash"))
-        if not os.path.isdir(os.path.join(os.path.join(self.path, ".Trash"), "binaries")):
-            os.mkdir(os.path.join(os.path.join(self.path, ".Trash"), "binaries"))
+        os.makedirs(self.trashed_binaries, exist_ok=True)
         os.rename(
             self.binary_path(name),
-            os.path.join(os.path.join(os.path.join(self.path, ".Trash"), "binaries"), name),
+            os.path.join(self.trashed_binaries, name),
         )
         self.binaries.pop(name)
 
     def delete_script(self, name: str):
-        if not os.path.isdir(os.path.join(self.path, ".Trash")):
-            os.mkdir(os.path.join(self.path, ".Trash"))
-        if not os.path.isdir(os.path.join(os.path.join(self.path, ".Trash"), "scripts")):
-            os.mkdir(os.path.join(os.path.join(self.path, ".Trash"), "scripts"))
+        os.makedirs(self.trashed_scripts, exist_ok=True)
         os.rename(
             self.script_path(name),
-            os.path.join(os.path.join(os.path.join(self.path, ".Trash"), "scripts"), name),
+            os.path.join(self.trashed_scripts, name),
         )
         self.scripts.remove(name)
+        for binary_metadata in self.binaries.values():
+            try:
+                binary_metadata.associated_scripts.remove(name)
+            except ValueError:
+                pass
+            if binary_metadata.init_script == name:
+                binary_metadata.init_script = None
 
     def reset_project(self):
         path = self.path
@@ -277,48 +287,46 @@ def reset_project(self):
             raw_metadata = json.load(f)
 
         self.scripts = [script["name"] for script in raw_metadata["scripts"]]
-        for script in self.scripts:
-            if not os.path.exists(self.script_path(script, check=False)):
-                if not os.path.exists(
-                    os.path.join(os.path.join(os.path.join(self.path, ".Trash"), "scripts"), script)
-                ):
-                    raise AttributeError(
-                        f"Trying to restore script {script} but the file is missing from .Trash"
-                    )
-                else:
-                    os.rename(
-                        os.path.join(
-                            os.path.join(os.path.join(self.path, ".Trash"), "scripts"), script
-                        ),
-                        self.script_path(script, check=False),
-                    )
-
         self.binaries = {}
 
         for binaryName, info in raw_metadata["binaries"].items():
             self.binaries[binaryName] = _OfrakProjectBinary(
                 info["associated_scripts"], info.get("init_script")
             )
-        for binary in self.binaries.keys():
-            if not os.path.exists(self.binary_path(binary, check=False)):
-                if not os.path.exists(
-                    os.path.join(
-                        os.path.join(os.path.join(self.path, ".Trash"), "binaries"), binary
+
+        self.name = raw_metadata["name"]
+        self.project_id = binascii.unhexlify(raw_metadata["project_id"])
+
+        self._restore_trashed_files()
+
+    def _restore_trashed_files(self):
+        for script in self.scripts:
+            try:
+                self.script_path(script)
+            except ValueError:
+                try:
+                    os.rename(
+                        os.path.join(self.trashed_scripts, script),
+                        self.script_path(script, check=False),
                     )
-                ):
+                except OSError:
                     raise AttributeError(
-                        f"Trying to restore binary {binary} but the file is missing from .Trash"
+                        f"Trying to restore script {script} but the file is missing from .Trash"
                     )
-                else:
+
+        for binary in self.binaries.keys():
+            try:
+                self.binary_path(binary)
+            except ValueError:
+                try:
                     os.rename(
-                        os.path.join(
-                            os.path.join(os.path.join(self.path, ".Trash"), "scripts"), binary
-                        ),
+                        os.path.join(self.trashed_binaries, binary),
                         self.binary_path(binary, check=False),
                     )
-
-        self.name = raw_metadata["name"]
-        self.project_id = binascii.unhexlify(raw_metadata["project_id"])
+                except OSError:
+                    raise AttributeError(
+                        f"Trying to restore binary {binary} but the file is missing from .Trash"
+                    )
 
     def _get_binary(self, name):
         if not name in self.binaries.keys():
diff --git a/ofrak_core/setup.py b/ofrak_core/setup.py
index ef3268314..925d62f5c 100644
--- a/ofrak_core/setup.py
+++ b/ofrak_core/setup.py
@@ -40,7 +40,7 @@ def read_requirements(requirements_path):
 
 setuptools.setup(
     name="ofrak",
-    version="3.1.0",
+    version="3.2.0",
     description="A binary analysis and modification platform",
     packages=setuptools.find_packages(exclude=["test_ofrak", "test_ofrak.*"]),
     package_data={
@@ -49,7 +49,7 @@ def read_requirements(requirements_path):
     install_requires=[
         "ofrak_io>=1.0,==1.*",
         "ofrak_type>=2.2.0rc0,==2.*",
-        "ofrak_patch_maker>=4.0.1rc0,==4.*",
+        "ofrak_patch_maker>=4.0.2rc0,==4.*",
     ]
     + read_requirements("requirements.txt"),
     extras_require={
diff --git a/ofrak_patch_maker/CHANGELOG.md b/ofrak_patch_maker/CHANGELOG.md
index e24e2aaa7..26ebf58bd 100644
--- a/ofrak_patch_maker/CHANGELOG.md
+++ b/ofrak_patch_maker/CHANGELOG.md
@@ -4,6 +4,8 @@ All notable changes to `ofrak-patch-maker` will be documented in this file.
 The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/) and adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
 ## [Unreleased](https://github.com/redballoonsecurity/ofrak/tree/master)
+
+## [4.0.2](https://github.com/redballoonsecurity/ofrak/compare/ofrak-patch-maker-v.4.0.1...ofrak-patch-maker-v.4.0.2)
 ### Fixed
 - Remove option to read or install toolchain.conf from/to "/etc/toolchain.conf" ([#342](https://github.com/redballoonsecurity/ofrak/pull/342))
 
diff --git a/ofrak_patch_maker/setup.py b/ofrak_patch_maker/setup.py
index e99f15180..d135259fb 100644
--- a/ofrak_patch_maker/setup.py
+++ b/ofrak_patch_maker/setup.py
@@ -31,7 +31,7 @@ def read_requirements(requirements_path):
 
 setuptools.setup(
     name="ofrak_patch_maker",
-    version="4.0.1",
+    version="4.0.2",
     description="PatchMaker tool for applying source-code patches to binaries",
     packages=setuptools.find_packages(exclude=("ofrak_patch_maker_test",)),
     package_data={"ofrak_patch_maker": ["py.typed"]},