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Seq-Gen

Sequence-Generator: An application for the Monte Carlo simulation of molecular sequence evolution along phylogenetic trees.

Version 1.3.5

© Copyright 1996-2025 Andrew Rambaut and Nicholas C. Grassly

Supported by The Wellcome Trust & The Royal Society of London

Institute of Evolutionary Biology,
University of Edinburgh,
Ashworth Laboratories,
King's Buildings,
Edinburgh EH9 3FL, U.K.

Originally developed at:

Department of Zoology,
University of Oxford,
South Parks Road,
Oxford OX1 3PS, U.K.

Installation

On most UNIX systems, to compile, type:

cd source
make

A binary called 'seq-gen' will be created in the source directory.

Usage

A manual for the use of the software is in the documentation folder or can be viewed here:

http://rambaut.github.io/seq-gen/manual