Merge pull request #413 from posit-dev/feat-cdisc-conformance

feat: CDISC conformance

Author: rich-iannone

great-docs.yml

@@ -409,6 +409,22 @@ reference:
         - name: ADaMVariableSpec
           members: true
 
+    - title: CDISC Submission Conformance
+      desc: >
+        Validate SDTM datasets for CDISC conformance. `validate_sdtmig()` is the primary entry point:
+        pass a dictionary of domain DataFrames and receive a `ConformanceReport` with 426 SDTMIG 3.4
+        rules evaluated in-process. For full submission-package checks (cross-dataset referential
+        integrity, SUPP-- linkage, Define-XML) use `SubmissionPackage`. For the authoritative
+        CDISC-certified rule set, use `validate_cdisc_submission()` (requires the CORE CLI) or
+        `SubmissionPackage.validate_conformance(engine="core")`. All paths return a `ConformanceReport`.
+      contents:
+        - validate_sdtmig
+        - validate_cdisc_submission
+        - name: SubmissionPackage
+          members: true
+        - name: ConformanceReport
+          members: true
+
     - title: Integrations
       desc: >
         Classes for integrating Pointblank with external observability and monitoring systems. Use

pointblank/__init__.py

@@ -64,11 +64,13 @@
     ADaMVariableSpec,
     Codelist,
     CodelistEntry,
+    ConformanceReport,
     MetadataImport,
     MetadataPackage,
     MissingValueCode,
     SDTMDomainTemplate,
     SDTMVariableSpec,
+    SubmissionPackage,
     VariableMetadata,
     adam_to_metadata,
     export_metadata,
@@ -81,8 +83,10 @@
     sdtm_to_metadata,
     validate_adam,
     validate_adam_structure,
+    validate_cdisc_submission,
     validate_sdtm,
     validate_sdtm_structure,
+    validate_sdtmig,
 )
 from pointblank.pipeline import Pipeline, PipelineResult
 from pointblank.schema import Schema, generate_dataset, schema_from_tbl
@@ -217,4 +221,9 @@
     "validate_adam_structure",
     "adam_to_metadata",
     "validate_adam",
+    # CDISC submission-package conformance
+    "SubmissionPackage",
+    "ConformanceReport",
+    "validate_cdisc_submission",
+    "validate_sdtmig",
 ]