[automation] Auto-update linters version, help and documentation (#6431)

Author: nvuillam

.automation/generated/linter-helps.json

@@ -64,7 +64,7 @@
     "npm-package-json-lint": "9.0.0",
     "perlcritic": "1.156",
     "php": "7.4.26",
-    "php-cs-fixer": "3.88.2",
+    "php-cs-fixer": "3.89.1",
     "phpcs": "4.0.0",
     "phplint": "9.6.2",
     "phpstan": "2.1.31",
@@ -86,9 +86,9 @@
     "rst-lint": "1.4.0",
     "rstcheck": "6.2.5",
     "rstfmt": "0.0.14",
-    "rubocop": "1.81.1",
-    "ruff": "0.14.1",
-    "ruff-format": "0.14.1",
+    "rubocop": "1.81.6",
+    "ruff": "0.14.2",
+    "ruff-format": "0.14.2",
     "scalafix": "0.14.4",
     "scss-lint": "0.60.0",
     "secretlint": "11.2.5",
@@ -101,7 +101,7 @@
     "shellcheck": "0.11.0",
     "shfmt": "3.12.0",
     "snakefmt": "0.11.2",
-    "snakemake": "9.13.3",
+    "snakemake": "9.13.4",
     "spectral": "6.15.0",
     "sql-lint": "1.0.0",
     "sqlfluff": "3.5.0",

.automation/generated/linter-versions.json

@@ -87,6 +87,11 @@ Note: Can be used with `oxsecurity/megalinter@beta` in your GitHub Action mega-l
   - [kics](https://www.kics.io) from 2.1.14 to **2.1.15** on 2025-10-26
   - [cspell](https://github.com/streetsidesoftware/cspell/tree/master/packages/cspell) from 9.2.1 to **9.2.2** on 2025-10-26
   - [terragrunt](https://terragrunt.gruntwork.io) from 0.91.1 to **0.91.5** on 2025-10-26
+  - [php-cs-fixer](https://cs.symfony.com/) from 3.88.2 to **3.89.1** on 2025-10-29
+  - [ruff-format](https://github.com/astral-sh/ruff) from 0.14.1 to **0.14.2** on 2025-10-29
+  - [ruff](https://github.com/astral-sh/ruff) from 0.14.1 to **0.14.2** on 2025-10-29
+  - [rubocop](https://rubocop.org/) from 1.81.1 to **1.81.6** on 2025-10-29
+  - [snakemake](https://snakemake.github.io/) from 9.13.3 to **9.13.4** on 2025-10-29
 <!-- linter-versions-end -->
 
 ## [v9.1.0] - 2025-10-07