Repositories list

• iupac-names

  Public
  Project that collects all possible used IUPAC names in literature into a CCZero database.

  Groovy

  •

  Creative Commons Zero v1.0 Universal

  •0•2•7•0•Updated Mar 30, 2025Mar 30, 2025

• cmlxom

  Public
  A Java library for processing Chemical Markup Language (CML) files.

  hacktoberfestchemical-markup-language

  Java

  •

  Apache License 2.0

  •6•4•2•0•Updated Mar 30, 2025Mar 30, 2025

• oscar4

  Public
  OSCAR (Open Source Chemistry Analysis Routines) is an open source extensible system for the automated annotation of chemistry in scientific articles.

  text-miningblueobeliskchemistry

  Java

  •

  Artistic License 2.0

  •4•31•2•0•Updated Mar 4, 2025Mar 4, 2025

• .github

  Public
  0•0•0•0•Updated Jan 26, 2025Jan 26, 2025

• euclid

  Public
  A Java library for 2D and 3D geometric calculations.

  hacktoberfest

  Java

  •

  Apache License 2.0

  •3•2•5•0•Updated Jan 18, 2025Jan 18, 2025

• chemicaltagger

  Public
  ChemicalTagger is a tool for semantic text-mining in chemistry.

  Java

  •

  Apache License 2.0

  •9•41•1•0•Updated Oct 6, 2024Oct 6, 2024

• chemicaltagger-webapp

  Public
  CSS

  •0•1•0•0•Updated Oct 6, 2024Oct 6, 2024

• blueobelisk.github.io

  Public
  The website.

  cheminformaticschemoinformaticsopenscience

  3•2•2•0•Updated Aug 5, 2024Aug 5, 2024

• svg

  Public
  A XOM for SVG.

  Java

  •0•0•0•0•Updated Jun 23, 2024Jun 23, 2024

• cifxom

  Public
  HTML

  •1•2•5•0•Updated May 23, 2024May 23, 2024

• reaction-cime

  Public
  CIME4R: Exploring iterative, AI-guided chemical reaction optimization campaigns in their parameter space (https://jcheminf.biomedcentral.com/articles/10.1186/s13321-024-00840-1)

  TypeScript

  •

  BSD 3-Clause "New" or "Revised" License

  •2•0•0•0•Updated May 10, 2024May 10, 2024

• chemdraw-converter

  Public
  Converts CDX and CDXML from and to CML

  Java

  •

  Apache License 2.0

  •2•11•2•0•Updated Feb 17, 2024Feb 17, 2024

• html

  Public
  A Java library for processing HTML.

  HTML

  •0•0•0•2•Updated Dec 17, 2023Dec 17, 2023

• jumbo6

  Public
  A Java library for processing CML.

  Java

  •0•0•0•1•Updated Dec 17, 2023Dec 17, 2023

• bodr

  Public
  Blue Obelisk Data Repository - your one stop place of element and isotope data.

  chemistryisotopeiupac+ 2blueobeliskblue-obelisk-data

  XSLT

  •5•10•9•2•Updated Nov 18, 2022Nov 18, 2022

• oscar4-uima

  Public
  Java

  •0•0•0•4•Updated Jul 1, 2022Jul 1, 2022

• pub-crawler

  Public
  HTML

  •0•0•0•19•Updated May 20, 2022May 20, 2022

• awards

  Public
  Repository to organize Blue Obelisk Awards.

  0•0•0•0•Updated Mar 11, 2022Mar 11, 2022

• wwmm-pom

  Public
  The wwmm-parent POM.

  Apache License 2.0

  •0•0•0•0•Updated Jun 27, 2021Jun 27, 2021

• oscar4-chebi

  Public
  HTML

  •

  Artistic License 2.0

  •0•0•0•0•Updated Jun 27, 2021Jun 27, 2021

• oscar4-cli

  Public
  A set of small programs to run bits of the OSCAR4 software.

  Java

  •

  Artistic License 2.0

  •0•0•0•0•Updated Jun 27, 2021Jun 27, 2021

• http-crawler

  Public
  Java

  •0•0•0•3•Updated Jun 4, 2021Jun 4, 2021

• crystaleye

  Public
  CIF crawler and database

  Java

  •0•0•1•3•Updated Jun 4, 2021Jun 4, 2021

• cmllite-validator-code

  Public
  CML validation via xpath expressions

  Java

  •

  Apache License 2.0

  •0•0•0•3•Updated Jun 4, 2021Jun 4, 2021

• jumbo-converters

  Public
  Converters for legacy to and from CML

  Java

  •

  Apache License 2.0

  •2•9•1•3•Updated Apr 26, 2021Apr 26, 2021

• chemtreebank

  Public
  Java

  •0•0•0•2•Updated Apr 26, 2021Apr 26, 2021

• osra-runner

  Public
  A wrapper to call OSRA (Optical Structure Recognition Application) from Java.

  NSIS

  •0•0•0•1•Updated Oct 13, 2020Oct 13, 2020

• jumbo-units

  Public
  Manages units and physical quantities

  Java

  •

  Apache License 2.0

  •0•0•1•1•Updated Oct 13, 2020Oct 13, 2020

• oscar4-taverna

  Public
  Java

  •0•0•0•1•Updated Oct 13, 2020Oct 13, 2020

• jumbo-testutil

  Public
  Test utilities for the JUMBO library.

  Java

  •0•0•0•1•Updated Oct 13, 2020Oct 13, 2020