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This repository was archived by the owner on Jul 31, 2025. It is now read-only.

Commit 7065550

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matentznmatentzn
committed
Lots of refactoring and new release
1 parent d125a52 commit 7065550

24 files changed

Lines changed: 231985 additions & 113885 deletions

‎patterns/definitions.owl‎

Lines changed: 1229 additions & 1229 deletions
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‎src/mappings/uberon.sssom.tsv‎

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@@ -202,7 +202,6 @@ UBERON:0000033 head semapv:crossSpeciesExactMatch TAO:0001114 semapv:Unspecified
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UBERON:0000033 head semapv:crossSpeciesExactMatch TGMA:0000002 semapv:UnspecifiedMatching
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UBERON:0000033 head semapv:crossSpeciesExactMatch WBbt:0005739 semapv:UnspecifiedMatching
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UBERON:0000033 head semapv:crossSpeciesExactMatch XAO:0003024 semapv:UnspecifiedMatching
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UBERON:0000033 head semapv:crossSpeciesExactMatch ZFA:0001114 semapv:UnspecifiedMatching
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UBERON:0000035 primary ovarian follicle semapv:crossSpeciesExactMatch EMAPA:35631 semapv:UnspecifiedMatching
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UBERON:0000035 primary ovarian follicle semapv:crossSpeciesExactMatch FMA:18634 semapv:UnspecifiedMatching
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UBERON:0000035 primary ovarian follicle semapv:crossSpeciesExactMatch MA:0002907 semapv:UnspecifiedMatching
@@ -7092,7 +7091,6 @@ UBERON:0002043 dorsal raphe nucleus semapv:crossSpeciesExactMatch EMAPA:35293 se
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UBERON:0002043 dorsal raphe nucleus semapv:crossSpeciesExactMatch FMA:68462 semapv:UnspecifiedMatching
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UBERON:0002043 dorsal raphe nucleus semapv:crossSpeciesExactMatch MA:0002980 semapv:UnspecifiedMatching
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UBERON:0002043 dorsal raphe nucleus semapv:crossSpeciesExactMatch TAO:0000366 semapv:UnspecifiedMatching
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UBERON:0002043 dorsal raphe nucleus semapv:crossSpeciesExactMatch ZFA:0000366 semapv:UnspecifiedMatching
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UBERON:0002044 ventral nucleus of posterior commissure semapv:crossSpeciesExactMatch EMAPA:35597 semapv:UnspecifiedMatching
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UBERON:0002044 ventral nucleus of posterior commissure semapv:crossSpeciesExactMatch FMA:68464 semapv:UnspecifiedMatching
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UBERON:0002044 ventral nucleus of posterior commissure semapv:crossSpeciesExactMatch MA:0001072 semapv:UnspecifiedMatching
@@ -8532,7 +8530,6 @@ UBERON:0002323 coelemic cavity lumen skos:narrowMatch NCIT:C25444 semapv:Unspeci
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UBERON:0002323 coelemic cavity lumen semapv:crossSpeciesExactMatch EHDAA2:0000267 semapv:UnspecifiedMatching
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UBERON:0002323 coelemic cavity lumen semapv:crossSpeciesExactMatch FMA:85006 semapv:UnspecifiedMatching
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UBERON:0002323 coelemic cavity lumen semapv:crossSpeciesExactMatch TAO:0001438 semapv:UnspecifiedMatching
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UBERON:0002323 coelemic cavity lumen semapv:crossSpeciesExactMatch ZFA:0001438 semapv:UnspecifiedMatching
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UBERON:0002324 muscle of back semapv:crossSpeciesExactMatch EMAPA:35161 semapv:UnspecifiedMatching
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UBERON:0002324 muscle of back semapv:crossSpeciesExactMatch FMA:85216 semapv:UnspecifiedMatching
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UBERON:0002324 muscle of back semapv:crossSpeciesExactMatch MA:0000496 semapv:UnspecifiedMatching
@@ -10408,7 +10405,6 @@ UBERON:0003040 central gray substance of midbrain semapv:crossSpeciesExactMatch
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UBERON:0003040 central gray substance of midbrain semapv:crossSpeciesExactMatch MA:0000209 semapv:UnspecifiedMatching
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UBERON:0003040 central gray substance of midbrain semapv:crossSpeciesExactMatch MA:0002895 semapv:UnspecifiedMatching
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UBERON:0003040 central gray substance of midbrain semapv:crossSpeciesExactMatch TAO:0000518 semapv:UnspecifiedMatching
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UBERON:0003040 central gray substance of midbrain semapv:crossSpeciesExactMatch ZFA:0000518 semapv:UnspecifiedMatching
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UBERON:0003041 trigeminal nerve fibers semapv:crossSpeciesExactMatch FMA:72501 semapv:UnspecifiedMatching
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UBERON:0003043 posterior part of anterior commissure semapv:crossSpeciesExactMatch EMAPA:37410 semapv:UnspecifiedMatching
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UBERON:0003043 posterior part of anterior commissure semapv:crossSpeciesExactMatch FMA:61964 semapv:UnspecifiedMatching
@@ -18781,6 +18777,7 @@ UBERON:0007811 craniocervical region skos:narrowMatch EV:0100009 semapv:Unspecif
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UBERON:0007811 craniocervical region skos:narrowMatch NCIT:C12418 semapv:UnspecifiedMatching
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UBERON:0007811 craniocervical region semapv:crossSpeciesExactMatch FMA:280881 semapv:UnspecifiedMatching
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UBERON:0007811 craniocervical region semapv:crossSpeciesExactMatch MA:0000006 semapv:UnspecifiedMatching
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UBERON:0007811 craniocervical region semapv:crossSpeciesExactMatch ZFA:0001114 semapv:UnspecifiedMatching
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UBERON:0007812 post-anal tail skos:narrowMatch NCIT:C77663 semapv:UnspecifiedMatching
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UBERON:0007812 post-anal tail semapv:crossSpeciesExactMatch AAO:0010338 semapv:UnspecifiedMatching
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UBERON:0007812 post-anal tail semapv:crossSpeciesExactMatch MA:0000008 semapv:UnspecifiedMatching
@@ -21424,6 +21421,7 @@ UBERON:0011979 epiphysis of distal phalanx of manus semapv:crossSpeciesExactMatc
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UBERON:0011996 pharyngeal adductor semapv:crossSpeciesExactMatch TAO:0000463 semapv:UnspecifiedMatching
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UBERON:0011996 pharyngeal adductor semapv:crossSpeciesExactMatch ZFA:0000463 semapv:UnspecifiedMatching
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UBERON:0011997 coelom semapv:crossSpeciesExactMatch EHDAA2:0004731 semapv:UnspecifiedMatching
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UBERON:0011997 coelom semapv:crossSpeciesExactMatch ZFA:0001438 semapv:UnspecifiedMatching
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UBERON:0012054 myocoele skos:broadMatch VHOG:0001283 semapv:UnspecifiedMatching
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UBERON:0012054 myocoele semapv:crossSpeciesExactMatch EMAPA:31134 semapv:UnspecifiedMatching
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UBERON:0012055 left lung lower lobe bronchiole semapv:crossSpeciesExactMatch EHDAA2:0000947 semapv:UnspecifiedMatching

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