updating reqs

Author: philipmac

prefect.yaml

@@ -4,7 +4,7 @@
 
 # Generic metadata about this project
 name: image_portal_workflows
-prefect-version: 2.13.6
+prefect-version: 3.4.8
 
 # build section allows you to manage and build docker images
 build:
@@ -16,7 +16,7 @@ push:
 # https://docs.prefect.io/latest/api-ref/prefect/deployments/steps/pull/#prefect.deployments.steps.pull.set_working_directory
 pull:
 - prefect.deployments.steps.set_working_directory:
-    directory: /gs1/home/hedwig_prod/image_portal_workflows
+    directory: /data/home/svc_hpchedwig_dev/image_portal_workflows
 # - prefect.deployments.steps.git_clone:
 #     repository: [email protected]:niaid/image_portal_workflows.git
 #     branch: feature/prefect2

requirements-dev.txt

@@ -1,8 +1,6 @@
-
-
 coverage==7.5.3
 coverage-badge==1.1.0
-pytest==8.2.2
+pytest~=8.3
 pytest-cov==4.1.0
 pytest-env==1.1.5
 pytest-asyncio==0.23.7

requirements.txt

@@ -1,13 +1,10 @@
-
-
 python-dotenv==1.1.1
-prefect==3.4.8
+prefect[dask]==3.4.8
 griffe==1.7.3
 Jinja2==3.1.6
 requests==2.32.3
 natsort==8.4.0
 pytools@https://github.com/niaid/tomojs-pytools/releases/download/v3.3.2/pytools-3.3.2-py3-none-any.whl
 aiohttp==3.9.5
-prefect_dask==0.3.0
 simpleitk==2.5.2
-dask-jobqueue==0.9.0
+dask-jobqueue~=0.8