Generate images for docs #39

	name: Generate images for docs
	on:
	workflow_dispatch:
	jobs:
	rich_codex:
	runs-on: ubuntu-latest
	steps:
	- name: Check out the repo
	uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4
	with:
	# Use @nf-core-bot token to check out so we can push without a PR
	token: ${{ secrets.NF_CORE_BOT_AUTH_TOKEN }}

	# Add Node.js setup step
	- name: Setup Node.js
	uses: actions/setup-node@v4
	with:
	node-version: "20"

	- name: Set up Python
	uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b # v5
	with:
	python-version: 3.9

	- name: Remove type:module from package.json
	run: \|
	if [ -f "$GITHUB_WORKSPACE/package.json" ]; then
	sed -i '/"type": "module"/d' "$GITHUB_WORKSPACE/package.json"
	echo "Removed type:module from package.json"
	fi

	- name: Install Nextflow
	uses: nf-core/setup-nextflow@v2

	- name: Install nf-test
	uses: nf-core/setup-nf-test@v1

	- name: Install nf-core/tools
	run: pip install nf-core

	- name: Generate terminal images with rich-codex
	uses: ewels/rich-codex@01d0c612957f19aee84cf4d9643b6d0e231493d8 # v1
	env:
	COLUMNS: 100
	HIDE_PROGRESS: "true"
	NXF_ANSI_LOG: false
	with:
	commit_changes: "true"
	terminal_width: 100
	skip_git_checks: "true"
	search_include: ".github/workflows/rich-codex.yml"

	- name: Restore package.json
	run: \|
	git checkout "$GITHUB_WORKSPACE/package.json"

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