Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Provide export for DGE via diffabundance pipeline #18

Open
apeltzer opened this issue May 30, 2023 · 2 comments
Open

Provide export for DGE via diffabundance pipeline #18

apeltzer opened this issue May 30, 2023 · 2 comments

Comments

@apeltzer
Copy link
Member

No description provided.

@apeltzer apeltzer added this to the 1.1 milestone May 30, 2023
@apeltzer apeltzer modified the milestones: 1.1, 1.2 Jun 15, 2023
@apeltzer apeltzer modified the milestones: 1.2, 1.3 Aug 16, 2023
@apeltzer
Copy link
Member Author

apeltzer commented Nov 7, 2024

First needs to check if / how we can supply data to differentialabundance easily -- and write a short docs section on how to for the pipeline.

@apeltzer apeltzer modified the milestone: 1.3 Nov 7, 2024
@grst grst moved this from ToDo medium priority to On hold in nanostring Dec 2, 2024
@grst
Copy link
Member

grst commented Dec 2, 2024

Let's try to get SummarizedExperiment support for differentialabundance first. That would make it easier since only a single object is required.

@apeltzer apeltzer modified the milestones: 1.3, 2.0, 1.4 Dec 5, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
nanostring
Status: On hold
Milestone
No milestone
Development

No branches or pull requests
2 participants
@apeltzer @grst