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new module: leafcutter/clusterregtools #7247

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4 tasks done
JTL-lab opened this issue Dec 18, 2024 · 0 comments
Open
4 tasks done

new module: leafcutter/clusterregtools #7247

JTL-lab opened this issue Dec 18, 2024 · 0 comments
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new module Adding a new module

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@JTL-lab
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JTL-lab commented Dec 18, 2024

Is there an existing module for this?

  • I have searched for the existing module

Is there an open PR for this?

  • I have searched for existing PRs

Is there an open issue for this?

  • I have searched for existing issues

Further Information

Module will be built for leafcutter/clustering/leafcutter_cluster_regtools.py, found here: https://github.com/davidaknowles/leafcutter/blob/master/clustering/leafcutter_cluster_regtools.py

Leafcutter documentation showing example usage can be found here: http://davidaknowles.github.io/leafcutter/

Notably, a local module exists as part of nf-core/rnasplice: https://github.com/nf-core/rnasplice/blob/dev/modules/local/leafcutter_cluster.nf

Are you going to work on this?

  • If I'm planning to work on this module, I added myself to the Assignees to facilitate tracking who is working on the module
@JTL-lab JTL-lab added the new module Adding a new module label Dec 18, 2024
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