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fix snap and pre-commit
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docs/usage.md

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Following table contains all possible values for the samplesheet.
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| Column | Description | Type | Required |
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| ---------------- | ------------------------------------------------------------------------------------------------------------------------------------------------------------ | ------ | ------------------ |
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| `sample` | The custom sample name. Cannot contain spaces and doesn't have to unique. When the same sample has been given multiple times, the CRAM files will be merged. | string | :heavy_check_mark: |
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| `family` | The family name of the current sample. All samples in the same family will be merged together at the end of the pipeline. Cannot contain spaces | string | :x: |
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| `cram` | Path to the CRAM file to be used by the pipeline for the current sample. | string | :heavy_check_mark: |
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| `crai` | Path to the CRAM index file | string | :x: |
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| `sex` | The sex of the sample to be used by QDNAseq. Sex will be imputed when missing (Options: `male` or `female`) | string | :x: |
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| Column | Description | Type | Required |
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| -------- | ------------------------------------------------------------------------------------------------------------------------------------------------------------ | ------ | ------------------ |
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| `sample` | The custom sample name. Cannot contain spaces and doesn't have to unique. When the same sample has been given multiple times, the CRAM files will be merged. | string | :heavy_check_mark: |
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| `family` | The family name of the current sample. All samples in the same family will be merged together at the end of the pipeline. Cannot contain spaces | string | :x: |
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| `cram` | Path to the CRAM file to be used by the pipeline for the current sample. | string | :heavy_check_mark: |
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| `crai` | Path to the CRAM index file | string | :x: |
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| `sex` | The sex of the sample to be used by QDNAseq. Sex will be imputed when missing (Options: `male` or `female`) | string | :x: |
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See following samplesheet for a working example of a samplesheet (used by the `test` profile of the pipeline):
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tests/default.nf.test.snap

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"tabix": "1.19.1"
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},
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"Workflow": {
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"nf-cmgg/structural": "v0.3.0dev"
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"nf-cmgg/structural": "v0.3.0"
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},
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"task.process": {
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"bioconductor-qdnaseq": "1.34.0",

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