EGRET preprint available in bioRxiv #192
daweighill
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Our newest tool Estimating the Genetic Regulatory Effect on TFs (EGRET) is out on bioRxiv!
EGRET constructs genotype-specific gene regulatory networks by integrating individual genotypes, expression QTL (eQTL) data, and the impact of SNPs on TF binding.
EGRET is implemented in netZooR v0.9. To get up and running using EGRET, you can go through the Jupyter notebook Constructing genotype-specific gene regulatory networks with EGRET in netbooks.
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