Check typos

Metagenomics Illumina NF conversion and pipeline update #179

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Triggered via pull request May 8, 2025 17:24

bnovak32

synchronize #152

DEV_Metagenomics_Illumina_NF_conversion

Status Failure

Total duration 15s

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check_typos.yml

on: pull_request

Discover typos with codespell

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10 errors and 8 warnings

Discover typos with codespell: Licenses/Amplicon_and_Metagenomics_NOSA_License.pdf#L428

bu ==> by, be, but, bug, bun, bud, buy, bum

Discover typos with codespell: Licenses/Amplicon_and_Metagenomics_NOSA_License.pdf#L424

FO ==> OF, FOR, TO, DO, GO

Discover typos with codespell: scRNAseq/10X_Chromium_3prime_Data/GeneLab_CellType_GeneMarkers/GL-DPPD-7111_GeneMarker_Files/GL-DPPD-7111_Mmus_Spleen_CellType_GeneMarkers.csv#L21

Grap ==> Grep, Grape

Discover typos with codespell: scRNAseq/10X_Chromium_3prime_Data/GeneLab_CellType_GeneMarkers/GL-DPPD-7111_GeneMarker_Files/GL-DPPD-7111_Mmus_Liver_CellType_GeneMarkers.csv#L12

Grap ==> Grep, Grape

Discover typos with codespell: scRNAseq/10X_Chromium_3prime_Data/GeneLab_CellType_GeneMarkers/GL-DPPD-7111_GeneMarker_Files/GL-DPPD-7111_Mmus_Liver_CellType_GeneMarkers.csv#L9

Grap ==> Grep, Grape

Discover typos with codespell: scRNAseq/10X_Chromium_3prime_Data/GeneLab_CellType_GeneMarkers/GL-DPPD-7111_GeneMarker_Files/GL-DPPD-7111_Mmus_Heart_CellType_GeneMarkers.csv#L9

Grap ==> Grep, Grape

Discover typos with codespell: scRNAseq/10X_Chromium_3prime_Data/GeneLab_CellType_GeneMarkers/GL-DPPD-7111_GeneMarker_Files/GL-DPPD-7111_Mmus_Brain_CellType_GeneMarkers.csv#L9

Grap ==> Grep, Grape

Discover typos with codespell: scRNAseq/10X_Chromium_3prime_Data/GeneLab_CellType_GeneMarkers/GL-DPPD-7111_GeneMarker_Files/GL-DPPD-7111_Mmus_BoneMarrow_CellType_GeneMarkers.csv#L31

Grap ==> Grep, Grape

Discover typos with codespell: scRNAseq/10X_Chromium_3prime_Data/GeneLab_CellType_GeneMarkers/GL-DPPD-7111_GeneMarker_Files/GL-DPPD-7111_Mmus_Blood_CellType_GeneMarkers.csv#L21

Nin ==> Inn, Min, Bin, Nine

Discover typos with codespell: scRNAseq/10X_Chromium_3prime_Data/GeneLab_CellType_GeneMarkers/GL-DPPD-7111_GeneMarker_Files/GL-DPPD-7111_Mmus_Blood_CellType_GeneMarkers.csv#L16

Grap ==> Grep, Grape

Discover typos with codespell: Microarray/images/GL-microarray-overview.pdf#L0

Cannot decode file using encoding "utf-8"

Discover typos with codespell: 3rd_Party_Licenses/Microarray_Affymetrix_3rd_Party_Software_Licenses/tibble_LICENSE.pdf#L0

Cannot decode file using encoding "utf-8"

Discover typos with codespell: 3rd_Party_Licenses/Microarray_Affymetrix_3rd_Party_Software_Licenses/PYTHON_LICENSE.pdf#L0

Cannot decode file using encoding "utf-8"

Discover typos with codespell: 3rd_Party_Licenses/RNAseq_3rd_Party_Software_Licenses/PYTHON_LICENSE.pdf#L0

Cannot decode file using encoding "utf-8"

Discover typos with codespell: 3rd_Party_Licenses/Amplicon_and_Metagenomics_3rd_Party_Software_Licenses/kofam_scan_LICENSE.pdf#L0

Cannot decode file using encoding "utf-8"

Discover typos with codespell: 3rd_Party_Licenses/Microarray_Agilent_1_Channel_3rd_Party_Software_Licenses/PYTHON_LICENSE.pdf#L0

Cannot decode file using encoding "utf-8"

Discover typos with codespell: Licenses/Microarray_GPL-3.0_with_Additional_Requirements_License.pdf#L0

Cannot decode file using encoding "utf-8"

Discover typos with codespell: Licenses/Amplicon_and_Metagenomics_NOSA_License.pdf#L0

Cannot decode file using encoding "utf-8"