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CMCIBasicCourse201102Bib.tex
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CMCIBasicCourse201102Bib.tex
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% Kota Miura ([email protected])
% Course Textbook: Image Processing and Analysis Basics
% Copyright 2006 - 2016, Kota Miura
%
% This file was converted to LaTeX by Writer2LaTeX ver. 1.0.2
% see http://writer2latex.sourceforge.net for more info
%\documentclass[a4paper]{article}
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\usepackage{mathpazo} % math & rm
\linespread{1.05} % Palatino needs more leading (space between lines)
\usepackage[scaled]{helvet} % ss
\usepackage{courier} % tt
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\usepackage[T1]{fontenc}
\usepackage[ngerman,english,french,spanish,english]{babel}
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\usepackage{subfig}
\usepackage{float}
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\usepackage{hyperref}
%\hypersetup{colorlinks=true, linkcolor=blue}
\hypersetup{pdftex, colorlinks=true, linkcolor=blue, citecolor=blue, filecolor=blue, urlcolor=blue, pdftitle=CMCI Image processing / Analysis Course Series , pdfauthor=Kota Miura, pdfsubject=, pdfkeywords=}
\usepackage{amsmath}
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%\usepackage{mathtools}
\usepackage{color}
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\lhead{\fancyplain{}{\textit{EMBL CMCI ImageJ Basic Course}}}
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%indenting for case with Command Definition
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%command for menu tree
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%command for inline code
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%quick command for making space
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%making 1.5 spaced lines
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\onehalfspacing
%for inserting PDF
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%for placing code
% packge for codes
% --- source code matters ---
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% will be numbered
numbersep=5pt, % how far the line-numbers are from the code
backgroundcolor=\color{gray09}, % choose the background color. You must add \usepackage{color}
keywordstyle=\color{blue}, %added
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showtabs=false, % show tabs within strings adding particular underscores
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tabsize=2, % sets default tabsize to 2 spaces
captionpos=b, % sets the caption-position to bottom
breaklines=true, % sets automatic line breaking
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title=\lstname, % show the filename of files included with \lstinputlisting;
% also try caption instead of title
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%aboveskip={7.2pt} %supposed to be the space above llisting but dows not work.
%belowskip={7.2pt}
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%using eps
\usepackage{epstopdf}
%using natbib
\usepackage{natbib}
\bibpunct{(}{)}{;}{a}{,}{,}
\renewcommand\bibname{References}
% title page matters
% http://sunsite.bilkent.edu.tr/pub/tex/ctan/info/latex-samples/titlepages.pdf
\newcommand*{\titleTH}{\begingroup% T&H Typography
\raggedleft
\HRule\\
\vspace*{\baselineskip}
{\Large Kota Miura}\\[0.167\textheight]
{\bfseries EMBL-CMCI course I}\\[\baselineskip]
{\textcolor{Medium}{\Huge Basics of Image Processing and Analysis}}\\[\baselineskip]
{\small ver 2.1.3}\par
\vfill
%{\Large Centre for Molecular \& Cellular Imaging\\EMBL Heidelberg\\\plogo}\par
{\Large Centre for Molecular \& Cellular Imaging\\EMBL Heidelberg}\par
%\includegraphics[width=0.15\textwidth]{eps/rgb_logo_2006_win.eps}
\includegraphics[width=0.07\textwidth]{./Icon30pedge.jpg}\\[1cm]
\vspace*{3\baselineskip}
\HRule\\
\endgroup}
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\usepackage{pdfsync}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\begin{document}
\include{sections/titlepage}
%\setcounter{tocdepth}{3}
%\renewcommand\contentsname{}
%\tableofcontents
\begingroup
\hypersetup{linkcolor=black}
\tableofcontents
\endgroup
\setcounter{chapter}{1}
% section 1
\include{sections/s1Basics}
% section 2
\include{sections/s2intensity}
% section 3
\include{sections/s3filtering}
% section 4
\include{sections/s4segmentation}
% section 5
\include{sections/s5timeseries}
\clearpage
%\section{References}
%\cleardoublepage
\bibliographystyle{plainnat}
%\bibliographystyle{plain}
%\renewcommand{\bibname}{\section{References}}
\renewcommand*{\bibname}{References} % This will define heading of bibliography to be empty, so you can...
%\section{} % ...place a normal section heading before the bibliography entries.
\addcontentsline{toc}{section}{References}
\bibliography{sptdesk}
\clearpage
\include{sections/appendix}
\end{document}