dicepro/NAMESPACE at main · kalidouBA/dicepro · GitHub

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
# Generated by roxygen2: do not edit by hand

S3method(plot,dicepro)
S3method(plot_hyperopt,dicepro)
export(best_hyperParams)
export(contains_nan_or_inf)
export(create_gamma_lambda_plot)
export(dicepro)
export(full_metrics)
export(generateProp)
export(generate_ref_matrix)
export(heatmap_abundances)
export(makeTable1Tool)
export(metric_plot)
export(nmf_lbfgsb)
export(nmf_lbfgsb_hyperOpt)
export(nrmse)
export(objective_opt)
export(plot_hyperopt)
export(research_hyperOpt)
export(row_norm_pos)
export(run_CSx)
export(run_experiment)
export(running_method)
export(samplewise_metrics)
export(simulation)
export(simulation_bluecode)
import(ggplot2)
importFrom(Rcpp,sourceCpp)
importFrom(patchwork,plot_annotation)
importFrom(patchwork,plot_layout)
importFrom(patchwork,wrap_plots)
importFrom(stats,aggregate)
importFrom(stats,cor)
importFrom(stats,pnorm)
importFrom(stats,qpois)
importFrom(stats,quantile)
importFrom(stats,rbinom)
importFrom(stats,rnorm)
importFrom(stats,runif)
importFrom(stats,sd)
importFrom(utils,capture.output)
useDynLib(dicepro, .registration = TRUE)