pfam_scan/ChangeLog at master · jlily9/pfam_scan · GitHub

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ChangeLog for pfam_scan.pl

Version   Date        Main changes
-------   ----        ------------
1.0       13/10/09    First release of HMMER3.0b2 compatible script
1.1       15/10/09    Fixed minor bug with ipc run in active site module
                      as_search
1.2       16/12/09    Updated for HMMER3.0b3
	              Added -cpu option
1.3       23/04/10    Print CS lines (if present) when using -align option
                      Removed 'use Data::Dumper' and 'use Data::Dump'
		      statements from Pfam HMM modules
1.4	  04/01/13    Updated HMMResultsIO.pm to parse RF lines in HMMER3
                      output (fixes bug in -align option for families with
		      nested domains)
1.5	  15/10/13    Updated for HMMER3.1b
1.6	  01/03/17    Speeded up algorithm for predicting active site residues