cause/NAMESPACE at master · jean997/cause · GitHub

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# Generated by roxygen2: do not edit by hand

S3method(plot,cause)
S3method(plot,cause_post)
S3method(print,cause_summary)
S3method(print,summary_cause_post)
S3method(summary,cause)
S3method(summary,cause_post)
export(cause)
export(cause_download_example_gwas_data)
export(cause_grid_adapt)
export(est_cause_params)
export(gwas_format)
export(gwas_merge)
export(in_sample_elpd_loo)
export(ld_prune)
export(loglik)
export(loglik_ij)
export(loglik_ij_Z0)
export(loglik_ij_Z1)
export(loglik_loo)
export(loglik_mat)
export(loglik_samps_Z0)
export(loglik_samps_Z1)
export(map_pi_rho)
export(map_pi_rho_nonnull_eqg)
export(map_pi_rho_nonnull_fixed)
export(map_pi_rho_nonnull_geq)
export(map_pi_rho_nonnull_qge)
export(new_cause_data)
export(new_cause_data_fit)
export(read_standard_format)
export(recompute_elpd_table)
export(samp_from_grid)
export(setup_cause_pipeline)
export(setup_gwas_pairs)
export(step_quantile)
export(variance_pair_candidates)
import(ashr)
import(dplyr)
import(ggplot2)
import(mixsqp)
import(purrr)
import(tidyr)
importFrom(Rcpp,sourceCpp)
importFrom(RcppParallel,RcppParallelLibs)
importFrom(gridExtra,arrangeGrob)
importFrom(gridExtra,tableGrob)
importFrom(intervals,Intervals)
importFrom(intervals,interval_overlap)
importFrom(loo,loo)
importFrom(loo,loo_compare)
importFrom(matrixStats,logSumExp)
importFrom(readr,read_tsv)
importFrom(readr,write_tsv)
importFrom(scales,muted)
useDynLib(cause)