ValueError: Compression filter "default" is unavailable #129
Description
Does anyone know what the problem is?
(sarvey) behzadsarhadi@Basin:~/PichinchaSenDT142/miaplpy$ python /home/behzadsarhadi/miniconda3/envs/sarvey/lib/python3.10/site-packages/miaplpy/miaplpyApp.py /home/behzadsarhadi/PichinchaSenDT142/PichinchaSenDT142.txt --dostep load_data
Using default MintPy Path: /home/behzadsarhadi/miniconda3/envs/sarvey/lib/python3.10/site-packages
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MiaplPy version v0.2.1, date 2023-08-22
--RUN-at-2025-10-24 15:16:52.092630--
Current directory: /home/behzadsarhadi/PichinchaSenDT142/miaplpy
Run routine processing with arg_parser.py on steps: ['load_data']
Remaining steps: ['phase_linking', 'concatenate_patches', 'generate_ifgram', 'unwrap_ifgram', 'load_ifgram', 'ifgram_correction', 'invert_network', 'timeseries_correction']
Project name: PichinchaSenDT142
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20251024:151652 * miaplpyApp.py /home/behzadsarhadi/PichinchaSenDT142/PichinchaSenDT142.txt --dostep load_data
Project name: PichinchaSenDT142
Go to work directory: /home/behzadsarhadi/PichinchaSenDT142/miaplpy
copy default template file /home/behzadsarhadi/miniconda3/envs/sarvey/lib/python3.10/site-packages/mintpy/defaults/smallbaselineApp.cfg to work directory
read custom template file: /home/behzadsarhadi/PichinchaSenDT142/PichinchaSenDT142.txt
update default template based on input custom template
mintpy.compute.cluster: auto --> local
mintpy.compute.numWorker: auto --> 8
mintpy.reference.lalo: auto --> -0.1786, -78.5933
mintpy.troposphericDelay.method: auto --> no
copy smallbaselineApp.cfg to inputs directory for backup.
copy smallbaselineApp.cfg to pic directory for backup.
read default template file: /home/behzadsarhadi/PichinchaSenDT142/miaplpy/smallbaselineApp.cfg
update default template based on input custom template
miaplpy.load.compression: default --> auto
mintpy.load.processor: auto --> isce
copy miaplpyApp.cfg to inputs directory for backup.
read default template file: /home/behzadsarhadi/PichinchaSenDT142/miaplpy/miaplpyApp.cfg
miaplpy.load.compression: auto --> default
miaplpy.load.autoPath: yes --> yes
miaplpy.subset.yx: no --> no
miaplpy.subset.lalo: -0.199:-0.142,-78.612:-78.578 --> -0.199:-0.142,-78.612:-78.578
There are 8 workers available, numWorker is changed to 8
SAR platform/sensor : Sen
processor: isce
check auto path setting for Univ of Miami users for processor: isce
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prepare metadata files for isce products
prep_slc_isce.py -s ../merged/SLC -f *.slc.full -m ../reference/IW3.xml -b ../baselines -g ../merged/geom_reference --force
extract metadata from ISCE/topsStack xml file: ../reference/IW3.xml
extract metadata from geometry files: ['hgt.rdr.full', 'lat.rdr.full', 'lon.rdr.full', 'los.rdr.full']
writing ../reference/data.rsc
prepare .rsc file for geometry files
write file: ../merged/geom_reference/hgt.rdr.full.rsc
write file: ../merged/geom_reference/lat.rdr.full.rsc
write file: ../merged/geom_reference/lon.rdr.full.rsc
write file: ../merged/geom_reference/los.rdr.full.rsc
write file: ../merged/geom_reference/shadowMask.rdr.full.rsc
read perp baseline time-series from ../baselines
preparing RSC file for *.slc.full
[==================================================] 20160419_20171228 0s / 0s
prep_slc_isce.py: Done.
Loading .... ../merged/geom_reference/lat.rdr.full
Loading .... ../merged/geom_reference/lon.rdr.full
input bounding box of interest in lalo: (-78.612, -0.142, -78.578, -0.199)
box to read for datasets in y/x: (np.int64(17), np.int64(12), np.int64(1678), np.int64(524))
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searching slcs info
input data files:
slc : ../merged/SLC/*/*.slc.full
number of slc : 46
----- Number of interferograms in the selected network: 45 -----
<><><><><><><><><> step 1 - load_data (MiaplPy) <><><><><><><><><><>
Generate /home/behzadsarhadi/PichinchaSenDT142/miaplpy/network_single_reference/run_files/run_01_miaplpy_load_data
/home/behzadsarhadi/PichinchaSenDT142/miaplpy
20251024:151659 * load_slc_geometry.py --template /home/behzadsarhadi/PichinchaSenDT142/miaplpy/miaplpyApp.cfg --project_dir /home/behzadsarhadi/PichinchaSenDT142 --work_dir /home/behzadsarhadi/PichinchaSenDT142/miaplpy
SAR platform/sensor : Sen
processor: isce
check auto path setting for Univ of Miami users for processor: isce
Loading .... ../merged/geom_reference/lat.rdr.full
/home/behzadsarhadi/miniconda3/envs/sarvey/lib/python3.10/site-packages/osgeo/gdal.py:311: FutureWarning: Neither gdal.UseExceptions() nor gdal.DontUseExceptions() has been explicitly called. In GDAL 4.0, exceptions will be enabled by default.
warnings.warn(
Loading .... ../merged/geom_reference/lon.rdr.full
input bounding box of interest in lalo: (-78.612, -0.142, -78.578, -0.199)
box to read for datasets in y/x: (np.int64(17), np.int64(12), np.int64(1678), np.int64(524))
--------------------------------------------------
searching slcs info
input data files:
slc : ../merged/SLC/*/*.slc.full
number of slc : 46
--------------------------------------------------
searching geometry files info
input data files:
height : ../merged/geom_reference/hgt.rdr.full
latitude : ../merged/geom_reference/lat.rdr.full
longitude : ../merged/geom_reference/lon.rdr.full
incidenceAngle : ../merged/geom_reference/los.rdr.full
azimuthAngle : ../merged/geom_reference/los.rdr.full
shadowMask : ../merged/geom_reference/shadowMask.rdr.full
--------------------------------------------------
create HDF5 file /home/behzadsarhadi/PichinchaSenDT142/miaplpy/inputs/slcStack.h5 with a mode
create dataset /slc of <class 'numpy.complex64'> in size of (46, 512, 1661) with compression = default
Traceback (most recent call last):
File "/home/behzadsarhadi/miniconda3/envs/sarvey/bin/load_slc_geometry.py", line 7, in <module>
sys.exit(main())
File "/home/behzadsarhadi/miniconda3/envs/sarvey/lib/python3.10/site-packages/miaplpy/load_slc_geometry.py", line 104, in main
stackObj.write2hdf5(outputFile=inps.out_file[0],
File "/home/behzadsarhadi/miniconda3/envs/sarvey/lib/python3.10/site-packages/miaplpy/objects/slcStack.py", line 152, in write2hdf5
ds = f.create_dataset(dsName,
File "/home/behzadsarhadi/miniconda3/envs/sarvey/lib/python3.10/site-packages/h5py/_hl/group.py", line 193, in create_dataset
dsid = dataset.make_new_dset(group, shape, dtype, data, name, **kwds)
File "/home/behzadsarhadi/miniconda3/envs/sarvey/lib/python3.10/site-packages/h5py/_hl/dataset.py", line 108, in make_new_dset
dcpl = filters.fill_dcpl(
File "/home/behzadsarhadi/miniconda3/envs/sarvey/lib/python3.10/site-packages/h5py/_hl/filters.py", line 190, in fill_dcpl
raise ValueError('Compression filter "%s" is unavailable' % compression)
ValueError: Compression filter "default" is unavailable
Go back to directory: /home/behzadsarhadi/PichinchaSenDT142/miaplpy
###############################################################
Normal end of Non-Linear time series processing workflow!
##############################################################
Go back to directory: /home/behzadsarhadi/PichinchaSenDT142/miaplpy
################################################
Normal end of miaplpyApp processing!
################################################
Time used: 00 mins 7.5 secs
(sarvey) behzadsarhadi@Basin:~/PichinchaSenDT142/miaplpy$