Merge pull request #863 from hubmapconsortium/karlburke/removeMetadataIDFields

Karlburke/remove metadata id fields

Author: yuanzhou

src/schema/provenance_schema.yaml

@@ -201,6 +201,12 @@ ENTITIES:
         - lab_dataset_id
         - metadata:
           - lab_id
+          - acquisition_id
+          - library_id
+          - donor_id
+          - slide_id
+          - tissue_id
+          - parent_sample_id
     # Collection can not be derivation source but not target
     derivation:
       source: false
@@ -316,6 +322,12 @@ ENTITIES:
       - lab_dataset_id
       - metadata:
         - lab_id
+        - acquisition_id
+        - library_id
+        - donor_id
+        - slide_id
+        - tissue_id
+        - parent_sample_id
       - direct_ancestors:
         # Sample ancestors of a Dataset must have these fields removed
         - lab_tissue_sample_id
@@ -325,6 +337,12 @@ ENTITIES:
         # Both Sample and Dataset ancestors of a Dataset must have these fields removed
         - metadata:
           - lab_id
+          - acquisition_id
+          - library_id
+          - donor_id
+          - slide_id
+          - tissue_id
+          - parent_sample_id
     derivation:
       source: true
       target: true
@@ -669,7 +687,23 @@ ENTITIES:
     before_entity_update_validator:
       # Halt modification of entities which are "locked", such as a Dataset with status == 'Published'
       - validate_entity_not_locked_before_update
-    # Publications can be either derivation source or target
+    # Dataset can be either derivation source or target
+    excluded_properties_from_public_response:
+      - direct_ancestors:
+        # Sample ancestors of a Publication must have these fields removed
+        - lab_tissue_sample_id
+        - submission_id
+        # Dataset ancestors of a Publication must have these fields removed
+        - lab_dataset_id
+        # Both Sample and Dataset ancestors of a Publication must have these fields removed
+        - metadata:
+          - lab_id
+          - acquisition_id
+          - library_id
+          - donor_id
+          - slide_id
+          - tissue_id
+          - parent_sample_id    # Publications can be either derivation source or target
     derivation:
       source: true
       target: true