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Description
Hi,
I am working to automate our reporting using sierrapy command-line submission and formatting the .json output with a custom pandas script to pull out data into our report format. So far I have everything I need except I am missing certain comments that normally appear when using the web-interface submission. So far I have identified that I am missing comments that appear under "Other" or "Dosage" categories (I can successfully extract comments relating to specific resistances using pandas (i.e. NNRTI)).
So for the missing comments - I searched for them in the .json output run in parralel with the web-interface for the same sequence. These comments are present when using the web-interface but they don't exist in the sierrapy .json output file. Are these comments being pulled from elsewhere? If so, where can I find a list of comments used?