Skip to content
Open
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
4 changes: 2 additions & 2 deletions hail/python/hail/vds/combiner/variant_dataset_combiner.py
Original file line number Diff line number Diff line change
Expand Up @@ -93,7 +93,7 @@ class VariantDatasetCombiner: # pylint: disable=too-many-instance-attributes

combiner.run()

vds = hl.read_vds('gs://bucket/dataset.vds')
vds = hl.vds.read_vds('gs://bucket/dataset.vds')

The following combines four new samples from GVCFs with multiple extant Variant Datasets::

Expand All @@ -120,7 +120,7 @@ class VariantDatasetCombiner: # pylint: disable=too-many-instance-attributes

combiner.run()

vds = hl.read_vds('gs://bucket/dataset.vds')
vds = hl.vds.read_vds('gs://bucket/dataset.vds')


The speed of the Variant Dataset Combiner critically depends on data partitioning. Although the
Expand Down